Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03023 ATGGTGGGCTCAGGAGCAACATTTGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCTGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCTAGAGTTAGAGGTGGTAATGGCTGTAAAGTTGGTGATGATAACGGTAGCTTGATGTTGATGTGGGAAGATGGATTTTGTAGAGGAAGAGGTTCATCATCAGGTTGTGTTGAAGATATTGATGGAGAAGATCTTGTTAGAAAAGCTTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGCTGATGGGGAAAGTTGCATCTGATAAGTGTCACAAATGGGTTTTTAAAGAGCCAACAGAATGTGAACCAAACATCTCTAACTACTGGCAGAGTTCATTTGATGCTCTTCCTCCTGAATGGACAGACCAATTTGAGTCAGGCATTCAGACCATAGCTGTAATCCAAGCTGGCCATGGTCTTCTTCAACTTGGTTCTTGCAAGATTATTCCTGAGGATCTTCATTTTGTCCTAAGAATGAGGCACACATTTGAATCATTAGGCTACCAATCTGGTTTCTATCTCTCACAGCTTTTCTCATCAACAAGGAACACTTCCTCATCAACTTCACTTCCTTCAAAACCATCTTCCACCACCCTTCCAATTAGGCCACCTCCGCCACTCTTCAACTGGGGTCAGAGACCGCTATCTTCTCCTTCATCCATGCTATCTTCACCCAATTTTCAACAACATGCAGCTAGGCTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTTCTCATGCCTCATGCATCATCGCATGATCAAACTCCAAGAATTGAAGACATGATGGGAGGAGGAGAACATCATGAAAATGACATTAAATGGCCAAATGGTTTGTCTTTCTTTAATGCTTTAACTGGTAGAGCTGACGATGCTAAGCTTTTGTTTAATCCAGAGAACTTAGGAGGAAAACAAAGTGATCATGATCATAATCATCATCAAAATCATCATCACCCTCTTAATCAAAATCCTAATTCAGATGGTTCAAACCCAAATGAGTTTTTGAGCTTGGATAGTCACCATGATGGTGGAAGGAAAATGGACAAATTTAAGAGAAGTTTCACTTTACCTACAAGAGTTGCTTCATCATCTTCATCTACCTCAATGGATCATCATCAACAACAAGGTGTGGAGTATAGGAATTCAGAAGGTGGCATGTACTCAGATGTTATGGAGACCTTTTTGGAGTGA 1275 0.4141 MVGSGATFDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGSSSGCVEDIDGEDLVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTTLPIRPPPPLFNWGQRPLSSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASSHDQTPRIEDMMGGGEHHENDIKWPNGLSFFNALTGRADDAKLLFNPENLGGKQSDHDHNHHQNHHHPLNQNPNSDGSNPNEFLSLDSHHDGGRKMDKFKRSFTLPTRVASSSSSTSMDHHQQQGVEYRNSEGGMYSDVMETFLE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03023 424 MobiDBLite consensus disorder prediction 282 298 - -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 384 407 - -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 346 364 - -
Vifa1g03023 424 PANTHER GB|AAF34833.1 1 424 IPR044170 -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 324 407 - -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 209 230 - -
Vifa1g03023 424 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 190 IPR025610 -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 209 223 - -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 279 298 - -
Vifa1g03023 424 MobiDBLite consensus disorder prediction 366 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03023 Vifa-Chr1 474231614 474233918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03023 21 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.527 7.94e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03023 - - psat:127086298 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03023 1 474231614 474233918 Vifa1g03023 1 474231614 474233918 ECH