Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g03009 | ATGAATATTTCTATGTCTTGTTTCACCTTTCTTCTCTACACCTTCTTTCTCTTGTCTACTCTTTCTCTTTCATCATCACTTCCTTTGTCTTTGAAAACTCAAGCTTCAGTCTTAGTTTCTCTGAAACAAGATTTCCAATCCAAAACCTCTTTACAAACATGGAACATATCTAAGTACATGTCCCTTTGTACAACTTGGTATGGCATTCGATGTAACACAAACCATACTTCTGTTGTGTCACTCGACATATCAAACTCGAATGTTTCTGGAACCTTCTCGTCTTCCATCACAAAGCTAACAAGCTTGAGGTTCCTCAACATATCAAACAACATGCTCAATGGAAACCTAACTTGGAAATTCTCAAAGCTCAAAGAGCTCGAGGTTTTCGATGCTTACAACAATGAGTTCAATTCTTCACTTCCTCTTGGAGTCACTGAGTTGCATGGTCTCAAGTACTTGAATTTCGGCGGAAACTTTTTCCATGGAGACATTCCTGCAAGATATGGAAACATGTTGAGTTTGGAATATCTGTCTCTTGCAGGTAATGATTTGAGAGGTTTCATACCTTTTGAGCTTGGAAATCTTGTTAACTTGACACATCTTTTTTTAGGCTATTACAATGTGTTTGAAGGTGAGATTCCAAATGATTTTGGTAAACTTGTTAATTTGGTTCATCTTGATCTTGCTAACTGTGGTTTGAAAGGTGAAATTCCACATGAGTTAGGTAAACTTTACAAACTAGACACACTTTTCTTGCAAACCAATCAACTTAGTGGTTCAATTCCTTCTGAATTAGGGAATTTGACTAGTTTGAAATCTCTTGATTTGTCCAATAACGAGTTGATTGGAAACATACCTAAAGAGTTTTCTAATCTTCATCAACTCACACTCTTGAACTTGTTCATTAACAAACTTAATGGTGATATTCCATCTTTTGTTTCTGAGTTGCCGAATTTGGAAGTGTTGAAGCTTTGGCATAATCACTTCGAAGGTTCTATTCCTTCGAAGCTTGGAGAGAATGGTAAATTGATCGAGCTTGATTTATCGACGAACAAGCTCACTGGACTAGTTCCTAGATCTTTATGCATTGGAAAAAAGCTCGAGATTTTGATTTTACTCAACAATTTTCTGTCTGGCTCTTTGCCTAATGAGCTTGGTGAATGTTACACACTCGAAAGAGTTCGTTTAGGACGAAACAATTTAACAGGTTTGGTACCGAAAGGTTTTCTTTATTTGCCTGAGATCTCACTTCTTGAACTGCAGAACAATTTTCTCAGTGGTTTTCTTGCACAGCAAGAAATCACTAACACAAACAGTTCTAAACTCGGAGAGATGAATCTGTCGAACAATCGTTTATCTGGATCTCTCCCGAGTTCTATTGGAAATTTTCCGAATTTGCAGATTCTGCTTCTTCATGGAAATAGATTCTCAGGTGAAATTCCTCAAGATATAGGAAAGTTGAAGAAAATTCTAAGGTTGGATATGAGTTTCAACAACTTTTCAGGAAAAATTCCTGTTGAGATAGGTGAATGTTCTTCACTTACCTATTTAGATTTGAGTCAGAATCAATTATCAGGTCCTATTCCAATTCAGGTTTCACAAATTCACATACTTAACTATCTTAATGTGTCATGGAACAATCTAAACCAAACACTTCCTAAGGAACTTGGTTCTATTAAGGGCTTAACTTCAGCTGATTTCTCTCATAACAATTTCTCTGGCTCAATTCCTGAAATAGGACAATTCTCAGTGTTCAATTCTACTTCCTTTATCGGTAATCCCAAGTTATGTGGATATGAATCGAATCCATGCAGCCGTACTTCATCAGAAACATCTGAGTCTCCGAATCAAGAAAACGGTCGTGCGAAACGTGGAATTCTGGTAAAGTATAAGCTTCTATTTGCATTAGGACTTTTGGTTTGTTCGTTGGTTTTCGCAACGTTTGCTGTTATCAAAAGTCGAAAAGGAATTCGGAAGGACTCAAATTCATGGAAGTTAACAGCATTTCAGAAGATCGAATATGGAAGTGAAGACATCTTAGGTTGTGTAAAAGAAAGTAACATCATAGGAAGAGGTGGAGCTGGTGTTGTATATGGTGGAACAATGCCTAATGGAGAAAAAGTAGCTGTGAAAAAGTTGTTAGGAGTTCACAAAGGTTGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGTAGAATAAGGCACAGATACATTGTGAAGTTGTTGGCATTTTGTTCAAATGGAGACACAAATTTGCTTGTTTATGAGTATATGACAAATGGTAGTTTAGGTGAAGTGTTGCATGGAAAAAGAGGGGGGTTTCTTGAGTGGAAAGTTAGGGTGAAAATAGCAAGTGAAGCTGCTAAAGGACTTTGCTATTTGCACCATGATTGTTGTCCTTTGATAGTTCATAGAGATGTTAAGTCAAATAATATTTTGTTGGATTCTGAATTTGAAGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTTGCAAGAGAATAATGGTGGAACTTCTGAATGCATGTCTTCTATTGTTGGTTCTTATGGATACATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTATATAGCTTTGGAGTGGTGCTACTAGAGCTATTGACAGGGAGAAGACCAGTGGGAGATTTTGGTGAAGATGGAATGGATATTGTTCAATGGACAAAGTTACAAACTGATTGGAACAAAGAAAGTGTGGTGAAGATTCTTGATGGAAGGTTACATGAGATTCCTATAGAGGAAGCAATGCATATATTGTTTGTGGCTATGTGTTGTGTTGAAGAACAAAGTGTGGAAAGACCAACTATGAGGGAAGTTGTTGAAATGCTAGCACAAGTAAAGCAACCGAATGCATTTCATGTGTCATTAAGGAAATAG | 2922 | 0.3686 | MNISMSCFTFLLYTFFLLSTLSLSSSLPLSLKTQASVLVSLKQDFQSKTSLQTWNISKYMSLCTTWYGIRCNTNHTSVVSLDISNSNVSGTFSSSITKLTSLRFLNISNNMLNGNLTWKFSKLKELEVFDAYNNEFNSSLPLGVTELHGLKYLNFGGNFFHGDIPARYGNMLSLEYLSLAGNDLRGFIPFELGNLVNLTHLFLGYYNVFEGEIPNDFGKLVNLVHLDLANCGLKGEIPHELGKLYKLDTLFLQTNQLSGSIPSELGNLTSLKSLDLSNNELIGNIPKEFSNLHQLTLLNLFINKLNGDIPSFVSELPNLEVLKLWHNHFEGSIPSKLGENGKLIELDLSTNKLTGLVPRSLCIGKKLEILILLNNFLSGSLPNELGECYTLERVRLGRNNLTGLVPKGFLYLPEISLLELQNNFLSGFLAQQEITNTNSSKLGEMNLSNNRLSGSLPSSIGNFPNLQILLLHGNRFSGEIPQDIGKLKKILRLDMSFNNFSGKIPVEIGECSSLTYLDLSQNQLSGPIPIQVSQIHILNYLNVSWNNLNQTLPKELGSIKGLTSADFSHNNFSGSIPEIGQFSVFNSTSFIGNPKLCGYESNPCSRTSSETSESPNQENGRAKRGILVKYKLLFALGLLVCSLVFATFAVIKSRKGIRKDSNSWKLTAFQKIEYGSEDILGCVKESNIIGRGGAGVVYGGTMPNGEKVAVKKLLGVHKGCSYDNGLSAEIKTLGRIRHRYIVKLLAFCSNGDTNLLVYEYMTNGSLGEVLHGKRGGFLEWKVRVKIASEAAKGLCYLHHDCCPLIVHRDVKSNNILLDSEFEAHVADFGLAKFLLQENNGGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEDGMDIVQWTKLQTDWNKESVVKILDGRLHEIPIEEAMHILFVAMCCVEEQSVERPTMREVVEMLAQVKQPNAFHVSLRK | 973 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g03009 | 973 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 652 | 760 | - | - | |
Vifa1g03009 | 973 | SUPERFAMILY | Protein kinase-like (PK-like) | 679 | 958 | IPR011009 | - | |
Vifa1g03009 | 973 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 805 | 817 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g03009 | 973 | Pfam | Leucine Rich Repeat | 270 | 292 | IPR001611 | GO:0005515 | |
Vifa1g03009 | 973 | SMART | LRR_typ_2 | 123 | 147 | IPR003591 | - | |
Vifa1g03009 | 973 | SMART | LRR_typ_2 | 316 | 340 | IPR003591 | - | |
Vifa1g03009 | 973 | SMART | LRR_typ_2 | 171 | 195 | IPR003591 | - | |
Vifa1g03009 | 973 | SMART | LRR_typ_2 | 268 | 291 | IPR003591 | - | |
Vifa1g03009 | 973 | SMART | LRR_typ_2 | 463 | 487 | IPR003591 | - | |
Vifa1g03009 | 973 | SMART | LRR_typ_2 | 220 | 244 | IPR003591 | - | |
Vifa1g03009 | 973 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 174 | 960 | - | - | |
Vifa1g03009 | 973 | Pfam | Leucine rich repeat N-terminal domain | 32 | 72 | IPR013210 | - | |
Vifa1g03009 | 973 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 208 | 313 | - | - | |
Vifa1g03009 | 973 | Pfam | Protein kinase domain | 685 | 956 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g03009 | 973 | SUPERFAMILY | L domain-like | 367 | 610 | - | - | |
Vifa1g03009 | 973 | SUPERFAMILY | RNI-like | 79 | 416 | - | - | |
Vifa1g03009 | 973 | SMART | serkin_6 | 683 | 967 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g03009 | 973 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 120 | 207 | - | - | |
Vifa1g03009 | 973 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 761 | 972 | - | - | |
Vifa1g03009 | 973 | ProSiteProfiles | Protein kinase domain profile. | 683 | 971 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g03009 | 973 | Gene3D | Ribonuclease Inhibitor | 189 | 266 | IPR032675 | - | |
Vifa1g03009 | 973 | Gene3D | Ribonuclease Inhibitor | 267 | 341 | IPR032675 | - | |
Vifa1g03009 | 973 | Gene3D | Ribonuclease Inhibitor | 342 | 608 | IPR032675 | - | |
Vifa1g03009 | 973 | Gene3D | Phosphorylase Kinase; domain 1 | 666 | 760 | - | - | |
Vifa1g03009 | 973 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 320 | 608 | - | - | |
Vifa1g03009 | 973 | Gene3D | Transferase(Phosphotransferase) domain 1 | 761 | 970 | - | - | |
Vifa1g03009 | 973 | Gene3D | Ribonuclease Inhibitor | 30 | 188 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g03009 | Vifa-Chr1 | 473185292 | 473188468 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g03009 | 22 | 963 | Receptor kinase-like Gene Family | AT5G65700 | 55.201 | 0.0 | 1019 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vifa1g03009 | Pkinase | 1.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g03009 | - | - | gmx:100816158 | 1412.13 |