Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02993 ATGAAGCTTCTTCATAAAAATATTTGCTTCTTTTTGTTTCTTTTTAGTTTAATTTCAAGTTCACGAGGCTATACATTTTATGCTGGTGGAAAAGATGGATGGGTTTTGAACCCTTCTGAAAGTTACAATCAATGGACAGGGAGGAATAGATTTCAAGTCAATGATATTCTTGTTTTTAAGTACAAGAAGGAGTCAAACTCAGTGTTGGTGGTGAACAAAGAGGATTATGATAAGTGCAACAAGGAGAATCCAATCAAGAAATTTGAAGATGGTGATTCTGAGTTTCAGTTTGATAGATCTGGTCCTTTTTATTTCATTAGTGGACATGATCATAATTGTGAAAATGGTCAAAAGTTAATTGTTGTGGTCTTGGCTGTAAGAGAACCTCCTCCTTATGTGGCTGCACCTCCTCCTAAGCTTCTTCCTACACCTCCTTATGTTTCAATTACACCTCCAAAGACACCTTCTCCTGTTTATAGTCCTCCAAAAAGTACTCCCTCACCGGGAAATCAACCTCCCTATGTTCCAATTACACCTCCAAAAGCACCCTCCCCGGGAAATGAACCACCCTATGTACCAATCACACCTCCAAAAGCACCTTCTCCTGTTTACAATCCGCCTAATATTCCTTATACTCCTCCTAAAGTACCTTCCCCGGGAAATGAACCACCCTATATACCAATCACACCTCCAAAAACACCTTCTCCCGTTTACAATCCGCCTAATATTCCTTATACTCCTCCTAAAACACCTTCCCCAGGAAATGAACCACCATATGTACCAATCACACCTCCAAAAACACCTTCTCCCATTTACAATCCACCTAATGTTCCTTATACTCCTCCTAAAGCACCTTCCCCAGAAAATAAACCACCCTATGTACCAATCACGCCTCCAAAAGCTCCTTCTCCTATTCACACTCCTCCTAGTATTCCTTATACTCCTCCAAAAGCCCCATCGCCGAAAAATGAACCACCATATATACCAATTACACCTCCTAAAACTCCTTCTCCAATTCACACTCCTCCTAATATTCCATATTCTCCTCCAAAAACACCTTCTCCTATTCACTCCCCTCCTAATGTTCCATATACTCCTCCAAAATCACCTTCACCTGGAAATGAACCACCCTATACACCAATTACACCTCCAAAAACGCCTTCTCCCACTCACTCCCCTCCAAATGTTCCATATACTCCTCCAAAATCACCTTCTCCTATTCACACCCCTTCTATTGCTCCATATACTCCTCCAAAAGCACCTTCCCCTGAAAATCAACCACCCTATGTACCAATTACACCACCAAACACTCCTTCTCCCATTCACACTCCTCCAAATCATCCCCACACTCCTCCAAAAGCTCCTTCTCCTAGCAACCACCCACCTTATGTTCCAACAACACCACCAAAAACTCCTTCTCCTACTTACCATCCTATTCCTCCTAGTACAGTTCCATTCACTCCTCCAAAATCTCCTTCCCCTATAACTGAACCACCATATACACCAAATCCTCCTAAAACCCCTTCTCCTATCTCTCAACCACCATATGTACCAATTACACCACCAAAATCACCTTCTCCTAATGTTCCTTACACACCTCCAACAACTCCTTCTCCTAGCAACCACCCTCCAAAATACCCTTCTCCAATTTCTCAACCTCCATATGTTCCAACACCTCCAAACACTCCTTCTCCAACATCATCACAAGCACCTTATATTCAGACACCTCCAAACACTCCTTCTCCAACATCACAACCACCGTACATTCAAACACCACCAAACACTTCTTCACCAAGATCACAACCACCATACGTTCAAACACCTCCAAACTCTCCTTCTTCGCCAACATCACAACCACCATACATTTCAGCCCCTCCAAAAGCTACTCCATCTCCATCTTCTCAAACACCTCCAGGTGCTCATTCACCAATTTCACAACCTCCATATATTCAAACACCACCAAACTCTCATTCACCAACATCTCAACCACCTTACATTCAAACTCCACCAAACACTTCTACACCAAGATCACAGCCACCATACATTCAAACACCTCCAAACTCTCCTTCTTCGCCAACATCACAACCACCATACATTTCAGCCCCTCCAAAAGCTACTCCATCTCCATCTTCTCAAACACCTCCAGGTGCTCATTCACCAATTTCACAACCTCCATTTATTCAAACACCACCAAACTCTCATTCACCGACATCTCAACCACCTTACATTCAAACTCCACCAACCACCTCTTCTCCATCATCTTCTCAATCACCCCTTCTTCCAACTCCTCCAAAATCCTCTCAGCCTCCATCGATAGCAGAAACACCCTATGGAAATGGAATAGCACCATCTCCACTATCTCCATACCCTTCAAACAACTCACCATCACCATCAGTTTCACCTCTCGCAAGTTCACCAGTACCAACCCCTACTTCACCACCGGCTCCCACTCCAGCAAGCTCGCCGATATCAACCACTACTTCACCACCTGCTCCAACTCCGATAGGTTCCCCGGTATCAACCACTACTCCAACAGCATCTCCTGCAGGGTCCGTTCCGGCAGCAACAACTCCTTCACCTTCATCCACTTCCCCTGGAACACGAGGAACACCGTCATCTACCATCACAGGAAGTCCATCACCGACATCATCGAATGAAACAGCGCCAGGGAAGTCAAACGGAGTGTCGCATGCAAGTCCGTCAGGGACATGGGCATACTCCATTACAATTTTGGTCGGTGCTGCACTCACAAGTACTATTCTTGGATAG 2769 0.4438 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 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02993 922 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Vifa1g02993 922 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Vifa1g02993 922 CDD OsENODL1_like 24 124 IPR041846 -
Vifa1g02993 922 MobiDBLite consensus disorder prediction 838 901 - -
Vifa1g02993 922 MobiDBLite consensus disorder prediction 211 566 - -
Vifa1g02993 922 FunFam Early nodulin-like protein 1 23 128 - -
Vifa1g02993 922 MobiDBLite consensus disorder prediction 211 901 - -
Vifa1g02993 922 MobiDBLite consensus disorder prediction 143 198 - -
Vifa1g02993 922 MobiDBLite consensus disorder prediction 575 747 - -
Vifa1g02993 922 MobiDBLite consensus disorder prediction 788 837 - -
Vifa1g02993 922 Gene3D - 24 127 IPR008972 -
Vifa1g02993 922 PANTHER BLUE COPPER PROTEIN 25 165 IPR039391 GO:0009055
Vifa1g02993 922 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02993 Vifa-Chr1 468810323 468813419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02993 1 181 Phytocyanin Superfamily AT5G53870 49.198 2.04e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02993 - - psat:127086316 530.02