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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa1g02967
ATGGCGTACGCATCTGTGAAACCCACAAAGGTTGGTTTGGAGGACTCTCAGGAGCAGATCCACAAGATTAGGATCACTCTATCCTCTAAACATGTCCAAAATCTTGAAAAGGTTTGTGCTGATTTGGTTCGTGGTGCAAAGGACAAGCATCTCAGGGTCAAGGGACCGGTCAGGATGCCTACTAAAGTTCTTCATATCACTACAAGGAAGTCTCCTTGTGGTGAAGGTACCAACACTTGGGATAGATTTGAACTCCGAGTGCACAAGAGAGTCATTGATCTTTACAGTTCCCCAGATGTGGTTAAACAGATTACTTCTATCACCATTGAACCTGGTGTTGAAGTTGAGGTGACCATTGCCGACGCATGA
369
0.4526
MAYASVKPTKVGLEDSQEQIHKIRITLSSKHVQNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA
122
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa1g02967
122
Gene3D
Ribosomal protein S10 domain
7
121
IPR036838
-
Vifa1g02967
122
PANTHER
30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER
15
121
IPR001848
GO:0003735|GO:0005840|GO:0006412
Vifa1g02967
122
NCBIfam
30S ribosomal protein S10
21
119
IPR005729
GO:0003735|GO:0006412|GO:0015935
Vifa1g02967
122
SUPERFAMILY
Ribosomal protein S10
22
119
IPR036838
-
Vifa1g02967
122
PRINTS
Ribosomal protein S10 family signature
79
93
IPR001848
GO:0003735|GO:0005840|GO:0006412
Vifa1g02967
122
PRINTS
Ribosomal protein S10 family signature
22
35
IPR001848
GO:0003735|GO:0005840|GO:0006412
Vifa1g02967
122
PRINTS
Ribosomal protein S10 family signature
57
72
IPR001848
GO:0003735|GO:0005840|GO:0006412
Vifa1g02967
122
Pfam
Ribosomal protein S10p/S20e
24
118
IPR027486
-
Vifa1g02967
122
SMART
Ribosomal_S10_2
24
118
IPR027486
-
Vifa1g02967
122
FunFam
40S ribosomal protein S20
7
121
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa1g02967
Vifa-Chr1
461167967
461169660
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa1g02967
1
122
Cytoplasmic Ribosomal Protein Gene Family
AT3G47370
87.705
1.72e-76
220
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa1g02967
K02969
-
gmx:100500017
232.261
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