Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02915 ATGTCTGAGATGCAGAATCAGTTCCAGCAAAATTCCTCTGAAGATTGTTCTAGGAGTGCTCAATACCTTTCCTTTCCATCAGGTCAGCATGATTTATCGTCATCAGCACCTCAAAATTTGCAACAAATGTTGCATCCACACCAATTAGTTGCAGAATATCAAAATAAGTTCAGTTGTCTTACAGTTGGTGCACAATCCAATTCTAAACCAGTAGTTCTAAACCAATGGCCTGACTCACAAGATGGTAACCACATGTCTAACAATATTTCACACGACCAGCATCTCCATGTGGATTTTCATCAAAGAATATCAGGAAAGGATGAAGCTCATTACAATAACTTATCATCAGATGTATCTATGAGCCAAGCTGTTGCTCCTAGAGGCGCAGCTGATCCACCAGACTCAGGAAGTGATCTCAAAAATGCGCACAAAAATCAACAAAGGTGGCTCTTATTTCTACTTCATGCGCGACGATGTTCTGCTCCTGAAGGACGATGCCAAGAACGTTGTTGTTCTAGTGCACAAAATTTATGCAAGCACATAGATGGATGCACCCTAGGTCATCATTGTCCATACCCGTGTTATCATCATAATAGGGTATTGCTTCGTCATTTCATGCACTGCAAGGATCCGTGTTGCCCTGTTTGTGTTTTTGTAAGAAATTACCTGCGCACATTTCAACTTAAAGCTCAGATTCAGCCAGAATCTCAATCAAGTTTGCCAAGTGTGGTAAATGGATCGTGTAAATCTTACAATATTACAGCTATGTCATCCAGATTGATCTCAAATCCTACATTAGTTGTGGAAACTTCAGAAGGCTTGCACCCATCTCTAAAACACATAAAAAAAACTGAGCTGCACACTAATACAAACGCTAGCAATCAACACAAGACTAAGCTTGGTGGGAAAGCTGAAACTTCAAAACGGCAATTTATCTAA 939 0.4015 MSEMQNQFQQNSSEDCSRSAQYLSFPSGQHDLSSSAPQNLQQMLHPHQLVAEYQNKFSCLTVGAQSNSKPVVLNQWPDSQDGNHMSNNISHDQHLHVDFHQRISGKDEAHYNNLSSDVSMSQAVAPRGAADPPDSGSDLKNAHKNQQRWLLFLLHARRCSAPEGRCQERCCSSAQNLCKHIDGCTLGHHCPYPCYHHNRVLLRHFMHCKDPCCPVCVFVRNYLRTFQLKAQIQPESQSSLPSVVNGSCKSYNITAMSSRLISNPTLVVETSEGLHPSLKHIKKTELHTNTNASNQHKTKLGGKAETSKRQFI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02915 312 MobiDBLite consensus disorder prediction 122 141 - -
Vifa1g02915 312 MobiDBLite consensus disorder prediction 1 37 - -
Vifa1g02915 312 Pfam TAZ zinc finger 147 216 IPR000197 -
Vifa1g02915 312 MobiDBLite consensus disorder prediction 289 312 - -
Vifa1g02915 312 ProSiteProfiles Zinc finger TAZ-type profile. 137 219 IPR000197 -
Vifa1g02915 312 Gene3D TAZ domain 136 245 IPR035898 -
Vifa1g02915 312 SMART TAZ_2 140 219 IPR000197 -
Vifa1g02915 312 PANTHER CBP/P300-RELATED 6 299 IPR013178 GO:0004402|GO:0006355|GO:0016573
Vifa1g02915 312 SUPERFAMILY TAZ domain 142 224 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02915 Vifa-Chr1 454170805 454171743 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vifa1g02915 zf-TAZ 3.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02915 K04498 - gmx:100787114 407.142