Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02907 ATGGCGGAAAATGCGAAAGAAACAAGGTCGTTGGCCTTGACTCCTACCTGGTCTGTTGCCACTGTGTTGACCATCTTTGTTGCTGTCTCTTTGCTTGTGGAGCGCTCGATTAACCGTTTAAGCAATTGGCTGCGGAAAACTAGTAGAAAACCTTTGCTTGAAGCTTTGGAGAAGATGAAAGAAGAGTTGATGTTGCTCGGATTTATATCTCTCCTACTTACTGCTACCTCTGGCATGATAGCCAATATTTGCATTCCATCAAAGTTCTATAATAGTGCTTTTGCTCCATGCTCTAGATCTGAGATTGATAAAGAAATCGAAGAGAATGGGTCCGAAGGACGTAAATTATTGGCAGCATTTTCTTACCCTCGCTTAATTAGAAGGATGTTGAATGGAATCAACAGAAGCTCCTGCAAAGAGGGTTATGAACCATTTGTTTCGTATGAAGGTCTAGAGCAGTTGCATCGGTTCATTTTTGTCATGGCGATAACACATGTGTCTTACAGTTGTCTAACAATGCTGTTGGCCATTGTGAAGATTCACAGCTGGAGAGTATGGGAAGATGAGGCTCACATGGATCGGCGCAATTATTTAGCTGATATTACTAGGCAGCTGACTATGCGAAGGCAATCAACCTTTGTCAAGACTCATACATCAAACCCATTAGCTATTTGGATGACATGCTTTTATCGACAATTTGGGCGATCGGTGGTTCGTGCTGACTATCTTACCCTTCGCAAAGGCTTCATCATGAATCACAATCTTTCATCAAAATATGATTTCCACAGCTACATGGTTCGATCTATGGAAGAGGAATTCCAAAAGATAGTTGGTGTGAGTGGCCCACTCTGGGGATTTGTTGTTGGTTTCATGCTTTTCAACATTAAAGGATCTAATCTATATTTCTGGATAGCTATCATTCCTATATCTCTTGTTCTCTTGGTGGGAACAAAGCTACAACAAGTTATTGCAACGTTAGCACTGGAGAATGCTGGAATTACTGGTTTCTTCTCGGAAGCTAAGTTGAGGCCTCGCGATGAACTTTTCTGGTTTAAAAAGCCTGAACTATTACTTTCCTTGATCCATTTCATTCTCTTCCAGAATGCATTTGAATTGGCTTCATTCTTTTGGTTCTGGTGGCAGTTTGGATATAATTCATGCTTTATTCGGAATCACCTCCTTGTTTATTTAAGGCTAATCTTGGGATTTTCCGGCCAGTTTCTTTGCAGCTACAGCACGTTGCCACTTTACGCACTCGTTACACAGATGGGAACAAATTATAAGGCAGCATTAATTCCACAGAGAATAAGAGAAACCATTCATGGATGGGGTAAAGCAGCTAGGAAGAAGAGAAGACATGGTATGTTTCCTGATGACTCCACCGTTCATAGTCATACAGACACGAGCACTGTATTGTCTATTGAAGAAGATGATCATCGAATTATCGACAATTCCCTTCAAGACATTGCCACTGGCACTGAAGTAGAATTACAACCGGTAACAACTGTTACGGCTACCCCTTCCCCCCCTATTGCTAATGAAACTTCAAGTAGGGCTATTACGCCCCTTCTTCGACCCTCCGCTTCAGTATCTTCATCAGTACCATTCAGTTCTAGACAAGAACCTGTTTCAAGATCCTCCTCATTGCCAAATGGAAGTTAG 1662 0.4176 MAENAKETRSLALTPTWSVATVLTIFVAVSLLVERSINRLSNWLRKTSRKPLLEALEKMKEELMLLGFISLLLTATSGMIANICIPSKFYNSAFAPCSRSEIDKEIEENGSEGRKLLAAFSYPRLIRRMLNGINRSSCKEGYEPFVSYEGLEQLHRFIFVMAITHVSYSCLTMLLAIVKIHSWRVWEDEAHMDRRNYLADITRQLTMRRQSTFVKTHTSNPLAIWMTCFYRQFGRSVVRADYLTLRKGFIMNHNLSSKYDFHSYMVRSMEEEFQKIVGVSGPLWGFVVGFMLFNIKGSNLYFWIAIIPISLVLLVGTKLQQVIATLALENAGITGFFSEAKLRPRDELFWFKKPELLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHLLVYLRLILGFSGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARKKRRHGMFPDDSTVHSHTDTSTVLSIEEDDHRIIDNSLQDIATGTEVELQPVTTVTATPSPPIANETSSRAITPLLRPSASVSSSVPFSSRQEPVSRSSSLPNGS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02907 553 PANTHER MLO-LIKE PROTEIN 1 7 509 IPR004326 GO:0006952|GO:0016020
Vifa1g02907 553 MobiDBLite consensus disorder prediction 504 553 - -
Vifa1g02907 553 Pfam Mlo family 9 468 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02907 Vifa-Chr1 453556077 453560827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02907 3 551 MLO family AT5G53760 69.123 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02907 K08472 - gmx:100780486 901.353