Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02885 ATGGGAGATTGCAAGCAGGAAGCTTATCCTATAAAGAGGAAGATAGATACATATGTGGATTATGTGCAGCAGTTTGGTTTGTTTCATCCCGTACCTGAGTTGGCAAGACTACACCCGGGTACTCGGAAGCAGAGAGAACTTGTGGAGTCTTACAATGCTGATTTGCAAAGAAACGCTTGTCAAGAAAGTGACAGGGTTTATGGCAGCGCTAGCACCCATCACAAGAGCGGCAATGTTGACAAGAAAGACCAAAGAAAAAGTGAAGACAGTGATGAGAGGATCAAGACGAAGCAAACAAGATCAAGAAGGACAATAATTGTATTACTTCATCTCTGGATTTCTGAAGCGCTACCAACGTGTCTTCAATAG 369 0.4309 MGDCKQEAYPIKRKIDTYVDYVQQFGLFHPVPELARLHPGTRKQRELVESYNADLQRNACQESDRVYGSASTHHKSGNVDKKDQRKSEDSDERIKTKQTRSRRTIIVLLHLWISEALPTCLQ 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02885 122 MobiDBLite consensus disorder prediction 75 99 - -
Vifa1g02885 122 MobiDBLite consensus disorder prediction 62 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02885 Vifa-Chr1 450987037 450988318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02885 17 87 C2H2 Transcription Factor Family AT3G62240 36.620 9.16e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02885 K22381 - gmx:100780426 95.5153