Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02869 ATGGAACATAGAAGAAACTCATCATCATCATCATCAACATGGTTCCTATTCACAACTCTTTCTTGTCTTTTTCTTTCATGTTTCTTAGGATCTGTTGGAGCTTACAAAAATTACACAGTGGGAGATTCTTTAGGCTGGTTTGACAAACTTGAAAAACCTGCGGTTAATTATCAGAAATGGGTTGCCAAAAAACAATTCAGCTTGGGAGATTTTCTCATTTTCAATACGGACAGTAACCACACTATTGTTCAAACATACAATTTCACAACATACAAACAATGTGACTACGATGATGCACAAGACAAAGACACACTCCAATGGTCATCAGGTTCTCAATCCAACGGCGTAGTAACTCCACTGACAGTGGCAGTTCCTTTGTTGAAAGAAGGACCAACATATTTCTTCTCAAGTGATTATGATGGTGAGCAATGCAAAAATGGACAACATTTCAAAATAAACGTGACTCATGGATTAGGGTTGCCGAAGAGTCTTCTGCCGGAAGATGACTCTCCCTCGCCTAGTAGTCCAGTTTCCGGTGACGATGACTCGGCACCGGACACAACTGTTCCTTCCAATTTCAACAATCCTAAGGAAGACAAAGATGATGATAAAACAAGTGATGAGAAATCTGGTTCTTATTCAGTGTTGAAGTATGCACAACTTTACAACAAGTTTTATGTGTTTCTTGTCTTGTTAGGGGTGTTTTTGTTATTTTAA 717 0.3863 MEHRRNSSSSSSTWFLFTTLSCLFLSCFLGSVGAYKNYTVGDSLGWFDKLEKPAVNYQKWVAKKQFSLGDFLIFNTDSNHTIVQTYNFTTYKQCDYDDAQDKDTLQWSSGSQSNGVVTPLTVAVPLLKEGPTYFFSSDYDGEQCKNGQHFKINVTHGLGLPKSLLPEDDSPSPSSPVSGDDDSAPDTTVPSNFNNPKEDKDDDKTSDEKSGSYSVLKYAQLYNKFYVFLVLLGVFLLF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02869 238 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vifa1g02869 238 Pfam Plastocyanin-like domain 46 148 IPR003245 GO:0009055
Vifa1g02869 238 Gene3D - 35 158 IPR008972 -
Vifa1g02869 238 MobiDBLite consensus disorder prediction 162 210 - -
Vifa1g02869 238 ProSiteProfiles Phytocyanin domain profile. 36 156 IPR003245 GO:0009055
Vifa1g02869 238 PANTHER BLUE COPPER PROTEIN 36 176 IPR039391 GO:0009055
Vifa1g02869 238 MobiDBLite consensus disorder prediction 168 194 - -
Vifa1g02869 238 SUPERFAMILY Cupredoxins 36 154 IPR008972 -
Vifa1g02869 238 MobiDBLite consensus disorder prediction 195 210 - -
Vifa1g02869 238 FunFam Early nodulin-like protein 18 35 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02869 Vifa-Chr1 446352382 446353958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02869 8 204 Phytocyanin Superfamily AT1G08500 58.209 1.69e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02869 - - gmx:100499721 271.937