Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02857 ATGGAAAAGATGGATGCGAAGAGTGCAAAATATATGACTGAGATGATATTAGATAATACAATTTTTCCGTTTGTAAGTATTAATACAACCTTTTCCGATAAAGACCTGAAATTTTTAGTCCTAGATGTGTGTATCGACATGCCACCAAGGGTTGTATCGGATGGAATTTGGGCTAATCGCGATTATGGTGTAATGCCGATGAAAACAACTCTGCCGTTGTTAGAGCTGCAAATTCTTACAATCTTTGCCATTACTCAAAGCTTTCATTTGGTTCTTAAGCGACTCGGTGTCCCTTATTTCGTTTCACAGATCATGGCTGGTTTGGTTTTAGGTCCTTCGTTGCAGATTTCAGATTCATGGAATCATTTCAAAAACAAGTTGTTTCCTTATGGTTCTGAGGATGTTATAAGTGTGATATCGATAATCGGTTATGGATTATTCCTGTTTCTAAATGGTGTGAAAATGGATTTCAGCATGATAATGAGAACAGGTAGAAAAGCGTGGACGATAGCGTTTTGTTCGATTGGGATTCCGATGTTGCTTGGGCTTGGAATGACTTACATGTTCTTAGCAGATTGGCAAAACTACCTCGGAGAATATGAATCGAAAAATCTTCCTGTTATTGTTATAGGACACAGTGGTTGTTACTTTGCTGTCATATCTTCATTGCTCTCTGATCTTGATATTCTTAACTCGGAACTCGGACGTTTAGCTCTCTCAACAGCTATGGTTATGGATGCTTTCAACTCAGTTGTTCAAGGAATCGGCACGGCTTTTATTAGCAGCATTAAAACCGATTCACACGATGTTGATAATAGAAAAGGACTCGGTAAAGCTCTCTTAACTGTTCTCTACTACTTCTGTTTCCTAGGAGTCACTCCTCTTTTGTTGCGTCCGGTAATGAGATGGTTTGTTAGAAACACACCAGAAGGTAGACCAATGAAGAAATCATACACCTATATCGTGTTCATCATGGCTCTTGCAGTAGGAATGTGGGGAACAATATCGAACCAAAGTGTTTTAGCCGGATTCTTAATTCTCGGTCTTATCGTACCTGATGGTCCTCCGTTAGGAACCGAAATGATTAAGCAGTTGGAGTTGTTTTCGATTTGGTTTCTTTGTCCTGTTTTCGTCACAAGCTGTGCTATGAAAGTCGATATTGGTGTAGATGTTGATAGCAAGTTGATTCTTGTTTTGGCTGGGATTATTGTTCTTATTCATTTGTTTAAGATGCTCATGACAATTGGAATTTGTTGGTATTGTAACATGCCTAAGACTGATGGTTTGTGTCTTGCTCTCATGTTAAGCTGTAAAGGTGTTGTGGATTTTTGCACCAATGTGTTTCTTCATGATGCTATGCTTATGAGCAATGAAGCACTGTCTGTCATGACTATAGGTGTGTTGGTGTTGGGAACTTCGGCGCGAATCGGTGTGAAGTTCTTGTATGACCCTTCAAGGAAATATGCAGGTTATCAAAAAAGGAACATCTTGAAATTGAAACCAAACTCAGAGCTTAGGATAGTTTCATGCATCCACAAACCAAGTCACATAACTCCAATCAAGAATATTCTTGAGATTTTCTGTCCAACAACAAGCAATCCATTGGTAGTTCATGTATTGCATCTCATGGAGCTTGTTGGAAGATCCTCTCCCGTTTTCATCTCGCATCGTCTTCAAGAACAGGTTGGTTCAGGTCACCATACTTTCTCTGAGGACGTCATTGTTACATTTGATCTTTTTGAGCATGACAACGCGGGTACTGTATCGGCTAGTACCTACACGGCTATATCTCCGTCACATTTAATGCACGACGATATCTGTTATCTTGCGTTGGACAAACTTGCATCCATCATCCTTCTTCCTTTTCATTTGAAATGGGCAGAAGATGGTTCTGTCGAATCCGCAGACGAGAATGTTAGGTCTTTGAACATTAAGGTTCTTGAAAGAGCACCGTGTTCGGTCGCGATCCTTGTCAATCGAGGATATGCTTCTTCTATCAGCTTAAACGATAATACAAAGGAAATCGCGCTGATTTTCTTAGGGGGTCCAGATGACAGAGAAGCATTGTGTTTGGCAAAAAGGGCTATCAAAGGAAATGCTTTTCACTTAGTTGTGTATCACTTGGTTTCAACAAGCAAGAATGATGAGTTCAGTAATTGGGATGTTATGCTTGATGATGAGATACTAAAAGATGTTAAAGGAATTTACGGTAGTGTAGACAATGTGATCTATGATAGAGTAAACGTTGAAAACACTTCAGATACAACTGCATTCATCTCAGATATCGCGAATCAGTACGATTTCATTATCGTCGGGAGGCGTAACAAGATCAAATCGCCTCAGACAGCAGGACTTGAAGATTGGACCGAGTATCCCGAGTTAGGTGCGATTGGCGATTTGCTTGCTTCAGCAGATACTAATACCAAAGCTTCAATTTTAGTTGTGCAGCAACAAGTAATGATCAAGTCAGGATGA 2475 0.3992 MEKMDAKSAKYMTEMILDNTIFPFVSINTTFSDKDLKFLVLDVCIDMPPRVVSDGIWANRDYGVMPMKTTLPLLELQILTIFAITQSFHLVLKRLGVPYFVSQIMAGLVLGPSLQISDSWNHFKNKLFPYGSEDVISVISIIGYGLFLFLNGVKMDFSMIMRTGRKAWTIAFCSIGIPMLLGLGMTYMFLADWQNYLGEYESKNLPVIVIGHSGCYFAVISSLLSDLDILNSELGRLALSTAMVMDAFNSVVQGIGTAFISSIKTDSHDVDNRKGLGKALLTVLYYFCFLGVTPLLLRPVMRWFVRNTPEGRPMKKSYTYIVFIMALAVGMWGTISNQSVLAGFLILGLIVPDGPPLGTEMIKQLELFSIWFLCPVFVTSCAMKVDIGVDVDSKLILVLAGIIVLIHLFKMLMTIGICWYCNMPKTDGLCLALMLSCKGVVDFCTNVFLHDAMLMSNEALSVMTIGVLVLGTSARIGVKFLYDPSRKYAGYQKRNILKLKPNSELRIVSCIHKPSHITPIKNILEIFCPTTSNPLVVHVLHLMELVGRSSPVFISHRLQEQVGSGHHTFSEDVIVTFDLFEHDNAGTVSASTYTAISPSHLMHDDICYLALDKLASIILLPFHLKWAEDGSVESADENVRSLNIKVLERAPCSVAILVNRGYASSISLNDNTKEIALIFLGGPDDREALCLAKRAIKGNAFHLVVYHLVSTSKNDEFSNWDVMLDDEILKDVKGIYGSVDNVIYDRVNVENTSDTTAFISDIANQYDFIIVGRRNKIKSPQTAGLEDWTEYPELGAIGDLLASADTNTKASILVVQQQVMIKSG 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02857 824 Pfam Sodium/hydrogen exchanger family 83 469 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa1g02857 824 PANTHER CATION/H + ANTIPORTER 54 819 - -
Vifa1g02857 824 Gene3D - 74 489 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02857 Vifa-Chr1 444353685 444356443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02857 43 815 Antiporter Super Family AT3G44900 35.916 5.00e-156 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02857 K26731 - mtr:11429863 1188.71