Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02779 ATGGATTCCGAATCAGAGTTCCCCGTTCCTAGTCGGGAGGAATCCGAACTCATAAAGGAATACTTTCAAACTGAATCTCAATTCGTGGCTGCTAAGGGCTACTTCGTAAAGTTCCAGCAAATTTGCTTACGGAAGCGCATTGTTTCATTAATCGACACGGTCTGGAGGAGTATTTCTTCTGATGCGTATATTCCGTATCTTGCTATGAACTATTTTGATCGCATCATTTCAAGATTCAATGAGATCTTGACGGATAGCGCCTTGGAAGGTCGTAATGATGCTGAAAAACTTCGTTTGATTGCAATCTGTTGTCTCATCATAGCTGCCAAGATAAGGATAAATAACTTCTCTGTTGATCAGCTTTTGAGAGACTTGAATGACATGAAAGTGGTTATAACTCATCAGATGGTAAGGAAAGCGGAGTATCTCATTCTTGATCAACTTAATTGGAAAATGCTACCGGTGACTGCCTTCTGCTTTCTGAACCACTATTACCCTTACTTCAAAGAATTTGGTGGTTTTAAACGTCGTTGCATCAATGAGATCATAATTCAAGCTCAGGGAGAGCACTCATTTGTTGAAAACACGCCTTCTCAGATTGCATTGTCCGCGTTTCTGGCTGCTTCCAAAATTGCATACCCCTCAAAATATGACAAAATGCTAAATCCTTCTAACTTTCATAAAATTGACAATGAAGAGGAGGTGAAGAACTGTTTGAATCCGATGATAAAGCTTTGCAGTAAATTGGACATCCATATTGAGCCTGCTGAATCAGGAATTGGCTCCTCTTGTAGTAAAGTTGTGAATTCATGTGAGGAAAAAGAAAAAGAAGATGGGACTACGGTAATCAACGGGGTTGGAACTTCATCGGTAAAGGAAATCCAACAAGGCAGTGGCAAGGCGTGGGTGGTGGGTTCAAGTGAAGAAAAAGAAAAAGAAGATGGGACTGCCATAATCAACGGGGTTGCAACTTCAACTGTAAAGGAAATCCTACATGGCAATGGCAATGGCAAGGTGGCTGTGGTGTGTTCAAGAGAAGAAAAAAACAAAGAAGATGGGACTGCAGTAATCAACTGGGTTGGAAATTCTACGGTAAAGGAAATCCAACATGGCAATAGCAATGACATGGTGGCTGTGGTGGTGGGTTCATGTCTATATAAAGAACTAGAAAATGGGACTGTGATAATCAACGGGGATGGAACTTCGAAGGTAAAGGAAATCCAACAAGCCAGTGGCAAGGCGGGGGTGGTGGGTTCAAGTGAAGAAAAAGAAAAAGATGGGACTGCCATAATCAAAGAAGTTGGAACTTCAAAAGTAGTGGAAATCCAACACAGCAAGAGCAAGGATATCGTGGTAAATTTTTGCGAAGAAGAAAATGAAGATGAAGAAGTTGGGACTGCGTTAGTCCAGCGGAGACAAGTCAGGCGCAACACAGATCCTTCTCAGGTGCAGGTGGAAGTGATCCAGCTCCCGATAGATGATAAAGACAGGGTTGAGGCTATAATCCGACGATCACTGGAAAAGTGCAACGCAATAGAGGCTGAAGAGCCACAGCTACAGATGGGTGGGTCAAGTTCACAGATTGTAGATCTTGTTGAACCAATGAACTTTAAACTGAAGTGGATGGCTGGAGCAACTTCTACATCAGCAATTCCTTATTGA 1662 0.4224 MDSESEFPVPSREESELIKEYFQTESQFVAAKGYFVKFQQICLRKRIVSLIDTVWRSISSDAYIPYLAMNYFDRIISRFNEILTDSALEGRNDAEKLRLIAICCLIIAAKIRINNFSVDQLLRDLNDMKVVITHQMVRKAEYLILDQLNWKMLPVTAFCFLNHYYPYFKEFGGFKRRCINEIIIQAQGEHSFVENTPSQIALSAFLAASKIAYPSKYDKMLNPSNFHKIDNEEEVKNCLNPMIKLCSKLDIHIEPAESGIGSSCSKVVNSCEEKEKEDGTTVINGVGTSSVKEIQQGSGKAWVVGSSEEKEKEDGTAIINGVATSTVKEILHGNGNGKVAVVCSREEKNKEDGTAVINWVGNSTVKEIQHGNSNDMVAVVVGSCLYKELENGTVIINGDGTSKVKEIQQASGKAGVVGSSEEKEKDGTAIIKEVGTSKVVEIQHSKSKDIVVNFCEEENEDEEVGTALVQRRQVRRNTDPSQVQVEVIQLPIDDKDRVEAIIRRSLEKCNAIEAEEPQLQMGGSSSQIVDLVEPMNFKLKWMAGATSTSAIPY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02779 553 PANTHER CYCLINS 20 243 IPR039361 -
Vifa1g02779 553 Gene3D - 31 153 - -
Vifa1g02779 553 CDD CYCLIN_AtCycD-like_rpt2 155 242 - -
Vifa1g02779 553 Gene3D - 19 223 - -
Vifa1g02779 553 SUPERFAMILY Cyclin-like 14 155 IPR036915 -
Vifa1g02779 553 Pfam Cyclin, N-terminal domain 18 152 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02779 Vifa-Chr1 433136584 433138979 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02779 18 206 Core Cell Cycle Gene Families AT1G70210 28.218 4.44e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02779 - K18812 psat:127086423 524.628