Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g02777 | ATGCAGGGTATTTGTTTGATGGTGTTGTTGATGGTGAAAATTGTGTTAGGGAATTCAGATACTGATGCACTTGTTGAACTAAAGAAGGGTATTCAAACTGACCCTTTTGGATTAGTTCTTAATTCTTGGGATTCCAAGTCATTAGACTCTAATGGATGTCCTCAAAACTGGTATGGAGTATTCTGTACTGAAGGCAATGTTATATCTATCACTCTTGACAATGCCGGTTTGGTTGGCGAGTTTAATTTCGTTGCAATTAGCACCCTTCCAATGCTCCGTAATTTGACAGTTGTAAACAACAGTTTCACCGGAAGTATGTCACGAATCGGTCCGATGAAATCACTTAATTTTCTCGACTTGTCTATCAACAAGTTTACTGGCTCGTTTCCTTCTACATTCGTCGAATCGCGTAGTTTAGTGTATGTGAATCTCTCTTCGAATGAGTTCAGCGGCACTATCCCGAACGTGTTTCACAAACTTGAGGAGTTGAAGTATATAGATATTCGCGGTAATAACTTTTCTGGTGATGTTATGCATATCTTTTATCAGATGGGAAGTGTGTTACATGTTGATTTAAGCGCCAACAGGTTTTCTGGTGCGTTGGATTTAGGACTCGGAGGTGTTTCGTTTCAATTCTCGATTCGATATTTAAATGCTAGCCACAATTCTTTGACGGGTGAGCTTTTTGCTCACGATGGTATGCCGTATCTTGATAATTTAGAGGTTTTTGATGCTAGTAATAACCAGTTAGTCGGTAATATACCTTCCTTCGGATTTATTGTATCGCTAAGGATTCTTCGGCTCCAATGCAATCAGTTGACAGGTTCCCTGCCAGAAACTTTGTTGAAGGAAAGTTCAACGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTTCCATTGGAAGCATTACTTCATTGACTCTAAGGAAGCTTAATATATCTTCAAACAAATTATCATGCTCATTACCTTTCAAAGTAGGACACTGTGCCATCATAGATTTGAGTAACAACATGTTGTCAGGTAATTTGTCAAGGGTCAAGTATTGGGGAAACTATGTAGAAGTTATTCAGCTAAGTTCAAACTCATTAACCGGAGCACTTCCGTACGAAACTTCTCAGTTTCTAAGGTTAACTTCACTTAAGGTATCCAATAACTCATTGGAGGGATTTCTGCCACCAGTTTTAGGAACATTTCCAGAACTAAAAGAGATTGATCTGAGTCTCAACCGGCTTTCTGGCTTCCTCCTACCGACCCTTTTCGCCTCGACCAAATTGACTACTCTTAATCTCTCAAACAATAAGTTTTTTGGACCAATTCCTTTTCAACTTCCAAGTAGTTCATTGCTTTCTTCCGAAAATTATAGTTTGACGTCGCTTGATCTTTCGAACAATAACTTGAATGGAACTCTTTCTCCAAAAATTAAGGAGCTTCATAATTTGGAATATCTTAACCTATGTAACAACAAATTGGAAGGTACTATTCCTAATGGACTTCCAGATGAATTAAGAGGATTCAATGTGTCCTTTAACAACTTTTCTGGTGTTGTACCTGATAACTTACTGCAGTTTCCTGAGTCAGCATTTCATCCAGGAAATCTTATGTTGATATTCCCGAATTCTCCATTGTCGCCTAAAGATAGTTCCAATTCCATCCTAGGTTTGAGGTCACATAAGAAAGTTTTCTCTAGGAGTGTCTTCATTACATGTTTAGTTACTGGTGCTTCTGTGATTGCTATTATGGCTGCAACGATTTTTTATAGGATTCGTCGGAAAAAAGAAATGGCTTCTAAACAAGACGCGACCGCTAGTGACATTGTCCAAGAGAGTACTTCATCATCAAAGAGAAGAAATTTGGACTCTTTGCTGCCTTCTCAGAGTGATGATACCGAAAACATTCATCCAACTGTAAAGAAGCCTCAACATCCTGAGTTAGTTAAGGACGAGGAAGGAACGTCTTCACCAATGTCTATTTTGTCGGCTTCGAATCCTTCACCTTCTACAAGCCGTCAGTTTGAGAATCCTAGCTCGCTCAATGTATCATCTCCGGATAAACTGGTCGGGGACTTACATCTATTCGATGGATCGTTGATGTTAACTGCAGAAGAACTTTCGTGTGCTCCGGCTGAAGTTATTGGTAGGAGTTGTCATGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGTTTTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGCAAAAAGGAGTTGGCAAGAGAAATAAAGAAACTCGGGACAATCAAGCATCCGAGTTTGGTTTCTTTTCTTGGTTGCTACCTCGGGCCAAAGGAGCATGAGAGATTGATTATATCAAATTTCATGAATGCATATTCTTTGGACATTTATCTCCATGAGGCTGATAGAAGAAATCTCAATCCTTTGTCCCTTGACGAAAGGCTTAGGGTGGCCGTAGAAGTCGCGCGGTGTCTACTTTTCCTACACACTGAGAAATCCATACCTCATGGCAATCTCAAATCCACAAACATTCTACTAGAAACTCCAAACAGAAATGCCTTGCTCACTGACTACACCCTGCATCGAATACTCACCGCAGCTGGCACGTCCGAGCAAGTTCTGAATGCAGGTGCACTTGGTTACCGTCCGCCTGAGTTTGCTAGATCAACCAAACCAAGCCCTTCTTTAAAGAGTGATGTCTACGCATTCGGAGTCGTCTTGTTAGAGCTCCTAACAGGAAGAAAGTCAGGAGAAATAGTGTCGGAGATTCCTGGCGTGGTGGAACTTACGGAATGGGTGAGATTCTTAGTCGAACGAGATCGCTCTAACCAATGCATTGATAAGTCCCTTGCAGAAGGATCTATAATTCTTGATGAAATGCTAAAAGTGGCTATAAGATGCATTCTTCCAGCATCTGAAAGGCCTGACATGAAAACAGTCTTTGAAGATCTTTCAACAATAAGGGAGAGTTGA | 2964 | 0.4042 | MQGICLMVLLMVKIVLGNSDTDALVELKKGIQTDPFGLVLNSWDSKSLDSNGCPQNWYGVFCTEGNVISITLDNAGLVGEFNFVAISTLPMLRNLTVVNNSFTGSMSRIGPMKSLNFLDLSINKFTGSFPSTFVESRSLVYVNLSSNEFSGTIPNVFHKLEELKYIDIRGNNFSGDVMHIFYQMGSVLHVDLSANRFSGALDLGLGGVSFQFSIRYLNASHNSLTGELFAHDGMPYLDNLEVFDASNNQLVGNIPSFGFIVSLRILRLQCNQLTGSLPETLLKESSTMLSELDLSQNKLEGSIGSITSLTLRKLNISSNKLSCSLPFKVGHCAIIDLSNNMLSGNLSRVKYWGNYVEVIQLSSNSLTGALPYETSQFLRLTSLKVSNNSLEGFLPPVLGTFPELKEIDLSLNRLSGFLLPTLFASTKLTTLNLSNNKFFGPIPFQLPSSSLLSSENYSLTSLDLSNNNLNGTLSPKIKELHNLEYLNLCNNKLEGTIPNGLPDELRGFNVSFNNFSGVVPDNLLQFPESAFHPGNLMLIFPNSPLSPKDSSNSILGLRSHKKVFSRSVFITCLVTGASVIAIMAATIFYRIRRKKEMASKQDATASDIVQESTSSSKRRNLDSLLPSQSDDTENIHPTVKKPQHPELVKDEEGTSSPMSILSASNPSPSTSRQFENPSSLNVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSFLGCYLGPKEHERLIISNFMNAYSLDIYLHEADRRNLNPLSLDERLRVAVEVARCLLFLHTEKSIPHGNLKSTNILLETPNRNALLTDYTLHRILTAAGTSEQVLNAGALGYRPPEFARSTKPSPSLKSDVYAFGVVLLELLTGRKSGEIVSEIPGVVELTEWVRFLVERDRSNQCIDKSLAEGSIILDEMLKVAIRCILPASERPDMKTVFEDLSTIRES | 987 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g02777 | 987 | SUPERFAMILY | Protein kinase-like (PK-like) | 711 | 981 | IPR011009 | - | |
Vifa1g02777 | 987 | Gene3D | Phosphorylase Kinase; domain 1 | 706 | 785 | - | - | |
Vifa1g02777 | 987 | Pfam | Protein tyrosine and serine/threonine kinase | 712 | 922 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g02777 | 987 | Gene3D | Ribonuclease Inhibitor | 453 | 528 | IPR032675 | - | |
Vifa1g02777 | 987 | Gene3D | Transferase(Phosphotransferase) domain 1 | 786 | 987 | - | - | |
Vifa1g02777 | 987 | FunFam | Nuclear pore complex protein NUP107 | 17 | 179 | - | - | |
Vifa1g02777 | 987 | SUPERFAMILY | L domain-like | 335 | 525 | - | - | |
Vifa1g02777 | 987 | ProSiteProfiles | Leucine-rich repeat profile. | 288 | 310 | IPR001611 | GO:0005515 | |
Vifa1g02777 | 987 | MobiDBLite | consensus disorder prediction | 655 | 682 | - | - | |
Vifa1g02777 | 987 | Pfam | Leucine rich repeat N-terminal domain | 18 | 62 | IPR013210 | - | |
Vifa1g02777 | 987 | PANTHER | OS07G0626500 PROTEIN | 6 | 93 | - | - | |
Vifa1g02777 | 987 | Gene3D | Ribonuclease Inhibitor | 356 | 452 | IPR032675 | - | |
Vifa1g02777 | 987 | MobiDBLite | consensus disorder prediction | 634 | 651 | - | - | |
Vifa1g02777 | 987 | MobiDBLite | consensus disorder prediction | 603 | 633 | - | - | |
Vifa1g02777 | 987 | Gene3D | Ribonuclease Inhibitor | 181 | 355 | IPR032675 | - | |
Vifa1g02777 | 987 | Gene3D | Ribonuclease Inhibitor | 18 | 180 | IPR032675 | - | |
Vifa1g02777 | 987 | Pfam | Leucine Rich Repeat | 482 | 501 | IPR001611 | GO:0005515 | |
Vifa1g02777 | 987 | Pfam | Leucine Rich Repeat | 427 | 451 | IPR001611 | GO:0005515 | |
Vifa1g02777 | 987 | FunFam | Leucine-rich repeat receptor-like protein kinase | 693 | 785 | - | - | |
Vifa1g02777 | 987 | ProSiteProfiles | Protein kinase domain profile. | 708 | 984 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g02777 | 987 | SUPERFAMILY | L domain-like | 20 | 326 | - | - | |
Vifa1g02777 | 987 | MobiDBLite | consensus disorder prediction | 600 | 682 | - | - | |
Vifa1g02777 | 987 | PRINTS | Leucine-rich repeat signature | 459 | 472 | - | - | |
Vifa1g02777 | 987 | PRINTS | Leucine-rich repeat signature | 480 | 493 | - | - | |
Vifa1g02777 | 987 | Pfam | Leucine rich repeat | 114 | 173 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g02777 | Vifa-Chr1 | 432822397 | 432825786 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g02777 | 18 | 985 | Receptor kinase-like Gene Family | AT5G01890 | 28.766 | 1.33e-80 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vifa1g02777 | PK_Tyr_Ser-Thr | 6.8e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g02777 | - | - | psat:127117920 | 1751.87 |