Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02774 ATGGATCCCAAGACCGGGTTCGCCGATATTACTGATAAGGAAAAGCAAGTTATAATAAGCTACTCCGATGTAGAAATGTTCTTCGTGGCCAGTAAATACTTCTACCAAAACACCGAGAACGCTTTTTTCCGAAAGCACGCTGTTGCAATAATCTCCATGCTCGCGAAGAGGATTGATAATGATACACTAATTCCGTATCTTGCTATGAATTATTTTGATCGCTTTTTTTCCAAAAACAGTTCGATGTTGGAGGATGTTGAAGGGTTCATCGATATTATAAAAGTTCGTTTGATTGCTATCGCCTGTCTCACCATAGCTGCCAAGATGAGGATAAAAGACTTCTCAATTGAACAATTTTTGATTACTTATTATAGGATTGTGAATGTGAGGATAAGTCATCATATGGTGATGAGAACGGAGCTTCTCATTCTCCGTGAACTTGACTGGGAAATTCAATCGGTAACTCCCTTCACCTTTCTGAACTTCTACTACCGTTACTTCAAAAAGTACGGTGGTTTTAAGCGTCGTTGCATCAATGAGATAATAGTTCAAGCTCAAGGAGAGCACACCTTCGTTGACTATTATCCTACTGTGATAGCAATCTCCGCTTTTCTGGCTGCTTCCCAAATTGCATATCCCGATCAGTATGGAGAAATTATAGTTCCCTTCACACTTACCAAAGTTTTGTCGATGTTGCTTCAGTATAAGGTCGTTCTTTGTGTGGATGCGATGGTTGATCTTTGCAATAAATTGAACATCCAGATTGAGACCCCTGAATCAGGAATTTCTTCCACTTCAGAGTTAAAAGAAAGCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTACAGGAAATCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTACAGGAAAGCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTACAGGAAAGCCAACAAAACAAGGAATCAGGAATTCCCTCCACTTCAGAGTTACAAGAAAGCCAACCAAACAAGGAATCGGGAATTCCCTCCACTTCAGAGTTAAAGGAAATCCAACAAGACAGGGGCAAGACGAAGATGGTAGTTGATTCAAATGAACAAGAAGATGATGACGAAGAAGTGGGGAGTCCGATAATGTGGCGATTTCTGAACATGAAGTGGAAATCTCGGGCGCTGAAGATATCAGAGAGGGTTAAGGAAGAAAACAAAAAACTAGACAAGGGAGAGACATCTGGTGGTGATGATAAGGCCAGGATTGAGGTTATAATCCCACAACCGTTGGAAAAGGGTGAGAAGATGGAGGGATACATTTCAGAAACTGCAGAGCTTGAAGAACTAAAGAGCCTTATGAACTTTGAACTGAAGTGGCCCGAAGAAGTTCCATCCACAGCTGAACTAGAAACACAATTACAAACACAAACAGTTAACCGTTCTAAGTCAAAAGGAAGAATTCTAAGAACTGCCAAGAAACTAGCTCATGGTGACTGCAAAGTCGGTTAG 1515 0.4099 MDPKTGFADITDKEKQVIISYSDVEMFFVASKYFYQNTENAFFRKHAVAIISMLAKRIDNDTLIPYLAMNYFDRFFSKNSSMLEDVEGFIDIIKVRLIAIACLTIAAKMRIKDFSIEQFLITYYRIVNVRISHHMVMRTELLILRELDWEIQSVTPFTFLNFYYRYFKKYGGFKRRCINEIIVQAQGEHTFVDYYPTVIAISAFLAASQIAYPDQYGEIIVPFTLTKVLSMLLQYKVVLCVDAMVDLCNKLNIQIETPESGISSTSELKESQQNKESGIPSTSELQEIQQNKESGIPSTSELQESQQNKESGIPSTSELQESQQNKESGIPSTSELQESQPNKESGIPSTSELKEIQQDRGKTKMVVDSNEQEDDDEEVGSPIMWRFLNMKWKSRALKISERVKEENKKLDKGETSGGDDKARIEVIIPQPLEKGEKMEGYISETAELEELKSLMNFELKWPEEVPSTAELETQLQTQTVNRSKSKGRILRTAKKLAHGDCKVG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02774 504 Gene3D - 153 237 - -
Vifa1g02774 504 MobiDBLite consensus disorder prediction 261 354 - -
Vifa1g02774 504 SUPERFAMILY Cyclin-like 132 253 IPR036915 -
Vifa1g02774 504 MobiDBLite consensus disorder prediction 355 369 - -
Vifa1g02774 504 Gene3D - 30 152 - -
Vifa1g02774 504 MobiDBLite consensus disorder prediction 261 379 - -
Vifa1g02774 504 Pfam Cyclin, N-terminal domain 27 151 IPR006671 -
Vifa1g02774 504 SUPERFAMILY Cyclin-like 30 151 IPR036915 -
Vifa1g02774 504 PANTHER CYCLINS 31 245 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02774 Vifa-Chr1 432122805 432125264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02774 30 216 Core Cell Cycle Gene Families AT4G03270 30.653 9.23e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02774 - K18812 psat:127086424 456.447