Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02773 ATGGATTTCGAACCAGAATTTCCCATTCCAACTAGGAAGGAAATGGAAACCATAACAAACTATCTCGCCGTGGAACCAGATTTCATAGCCGCGGAAAACTTTTTCACAACCCGTCGCCACATTCTTCTTCGCAAGCACGCCGTTTCAATTATCGCCAAGCTCTCGAGGAGTATTGTTCGTGATACTGATGCATTTATTCCTTATCTTGCTATGAACTATTTCGATCGTTTCCTTTCCAGACACAAAATGATTCTGAAGGATGTGGAAGGTTTTACGGATGCTGCAAAAGTTCGTTTGATTGCTATCGCTTGTCTCGCCTTATCTGCCAAGATGAGGACAGGATACTTCTCAGTTAATCAGCTTCTAGACAAGCTATTTTTGGAAATGGATGTGAGTATATCTTATCTGAAGGTAATGAGAATGGAGCTTATGATTCTTGATGAACTTCATTGGAAGATGCGATCTGTGACTGCTTTCTGCTTTCTGAACAACTATAACGCTTACTTCAAACGATTCGGTAGTTTTAAACGCCGTTGCATTAATGAGATCATAGTTCAAGCTCAAGGAGAGGTTGCCTTCATTCACTACTTGCCTTCTCACATTGCATTGTCTGCTTTTCTGGCTGCTGCCAAAATTGCATATCCCTCAAAGTTTAAGGAAATTGCAATACACATTGAGAGCAAAATTGACCTTCAAGGACAGGTGAAGGAATGTGTGAAGAAGATGGTTAATCTTTGCTATAGATTGAACATTGAGATAGAGGCCCCCGGATCAGAAATTTGCACGGCTTCAAGCAAAGTCGTGGCGGTATCTGAAGAGAAAACCAAAGAAGTTGGAACATCAGAGATAAAGGAAATCCAACAAAGCAGCGGTGAGGGGGCATTTGTGGTGGATTCATCTGAAGAAAAAGAAGAGACTCCGTTAATCAGGCAAAGACGGGACAAGGGAAAGATGGAGACTTCTCATTTGCAGGAGGACGTGGAGGTGTTATCTGATAAAACAGAAGTGGCAGCAGAAGAAATTGAGGTGGAAAAACGAAGATTGTTCAAGGGCAAGGCAGTGGATGTGACTGAAACATGTGATGATGATAAAGCCAGGGTTGAGGCTATAATTCAACGAGCAGTGGAAAAGGGTGCGGAGGCACAGGCACAACCACTGATGGAGGGATACATATCAGAGATTATAGAGCTTGGTGATCAGCCAAAGAGGCAGATGGACTTTGAGCTGAAGTGGCCCATTGTTGTTCCATCACTAGAAGAAGAAATAGAAGACGCGCAGCCACAAGAGTCCACAACCATAAGCCTTAAGATACCTGGGACTAGAAAGAATGTAAATTTTGGCTGCGGTACCTGCAACGTCAGTTAG 1365 0.43 MDFEPEFPIPTRKEMETITNYLAVEPDFIAAENFFTTRRHILLRKHAVSIIAKLSRSIVRDTDAFIPYLAMNYFDRFLSRHKMILKDVEGFTDAAKVRLIAIACLALSAKMRTGYFSVNQLLDKLFLEMDVSISYLKVMRMELMILDELHWKMRSVTAFCFLNNYNAYFKRFGSFKRRCINEIIVQAQGEVAFIHYLPSHIALSAFLAAAKIAYPSKFKEIAIHIESKIDLQGQVKECVKKMVNLCYRLNIEIEAPGSEICTASSKVVAVSEEKTKEVGTSEIKEIQQSSGEGAFVVDSSEEKEETPLIRQRRDKGKMETSHLQEDVEVLSDKTEVAAEEIEVEKRRLFKGKAVDVTETCDDDKARVEAIIQRAVEKGAEAQAQPLMEGYISEIIELGDQPKRQMDFELKWPIVVPSLEEEIEDAQPQESTTISLKIPGTRKNVNFGCGTCNVS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02773 454 Gene3D - 155 241 - -
Vifa1g02773 454 Pfam Cyclin, C-terminal domain 189 246 IPR004367 -
Vifa1g02773 454 Gene3D - 66 154 - -
Vifa1g02773 454 PANTHER CYCLINS 19 258 IPR039361 -
Vifa1g02773 454 Pfam Cyclin, N-terminal domain 18 153 IPR006671 -
Vifa1g02773 454 SUPERFAMILY Cyclin-like 15 153 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02773 Vifa-Chr1 432081433 432083633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02773 68 249 Core Cell Cycle Gene Families AT1G70210 33.862 5.55e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02773 - K18812 tpra:123896490 398.282