Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g02669 | ATGGTAATGATTCAACAATATATGGGTGTCATAAAGTCTGTATTTTGCATTGTCTTGGTTCTCAATATTGTAGCAGTTATCAGCATTGAAGAAAAGAAGGAAACAGAAGAAGAATTTGTTGGCAAATTGTTTGATCCTGCATCTGAAATATTGGACGAGGATACGGCAGAGATTCTATGTACCATTTGCATGGAAGATTTGATTCATGTAACGAAAGATATTGGAGATCTTGGCTTATGCCTACCAAAGGAATCACATAGTAGAACCAATGAAGTTACCTCAGAATTCAGATCAACGGCAAGAGAAAACATCCAAAATTTGATTAGTACTTGCAGTCCACAGTTGAAGGAAAACTTTCTTAACTGTTTGAGAAAACACAACGTTCCATTCCAAGATCAATCCAAGAATTGGATCACTGCTTACGAGGGATCAGGTTCGTCCAGAAGATATCCGCGTCGAGTTTCGCCTCGATACTTAGCAGAAAAACAAGACAATGATGGATCGTCTAAAAAAGATAAAAGTGATAATGGTTCTGATAAATCATCAAAGAAGAAGTCGAAATCTTCTGACTCTAAAAATAAACAACACGAGAAAGCGGTTTATAATGCCATGGCTATGACTGCAATGGTGATGTTTGTAATTGCAGCATGTACCTTTTTATGTTATTGTAGGTGTTGTGGAAGTGGTAGAGTTAATCAAACTGATGAAAGACCGCTTCTCAGCATGAGCAGGAGTGATTATTCTGTTGGTTCTTCAAATAATAACTCAAGAATTTCAGTAAAAGAGGAGAAACATGGAGTTCAATCAATAAGTAGTATTTTGGTTGAAGAGAAAAAGAACTCAATGAAAGAAGATGCTTCAAGACCATCTTTTGATCTTAAACCTCCACCTGGTAGGGTTGGAAATGGTAAGAACTCAATGAAAGAAGATGCTTCAAGACCATCTTTTGATCTTAAACCTCCACCTGGTAGGGTTGGAAATGGTATTCCGCCTTTGAAACCTCCTCCAGGAAGAACTGATCCTCTTCCACCCGAACCACCACCAGTTAAGAGTTTTGACTATGCCGTTAATCCACCGCCACCACCTCCTCCCCCTGGACTACAAATGCCTAGCAGTAGTGGTGCTCTTCCTCCCGGACTACCAAAGCCTGGCGGCGGTGGCCCTCCTCCACCTCCACCGCCGAAACTTGGCAATAGTGGTCCTAAGCCTCCTCCACCACCACCACCGCGTGGAAAATCAGGCGGTCCTCGACCACCACCACCTCCTAAGAGTGGTGCAGGTCCTCCAAGAGCTCCACCTCCATTTGGTCAAAAAGGTCCTAGACCTTTACCTAGTGGACCAAAGGTTCAAGGGAAAGTTGAAGTTAGTTCAGAAGGTGAAGGTGAAGCTGAAGCTGATGATGCTCCTAAAACCAAGTTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAAACTATGGTTTGGACTCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAAACGCTTTTTGGATATAGTACTCCATCAATGGAGAAAAAAGGTGGACAGAAGAAAGATCCTTCCTTCCGGGATGCTCCACCTCAGTTTACCCAAATCATTGAATCAAAGAAAGCACAAAATTTATCAATTCTGTTGAAAGCATTAAATGTGACACTTGAAGAAGTCCGTGATGCACTACTAGAAGGAAATGAGCTCCCAATAGAATTTCTTCACACCCTGATAAAGATGGCACCGACATCAGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGTAGTTTATCTCAACTTGGTCCTGCAGATCGGTTCCTTAAATCTTTGGTTGAGATTCCATTTGCTTTTAAACGAATGGAAGTATTGCTTTACATGAGTACTCTTCAAGAGGAACTCACCTCTACCCGAGATTCTTTCTCAATTTTAGAGGTTGCTTGTAAGGAACTAAGGAGCAGTAGATTATTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACAGGAAACCGAATGAACGATGGAACATTCCGCGGAGGTGCACTTGCGTTCAAACTTGACACACTACTAAAGTTATCCGATGTAAAAGGAGTAGATGGGAAAATCACCCTCTTACACTTTGTTGTTCAAGAGATGATGCGAACAGAAGGAATAAGAGCAGCTCGAATGGTGAAAGAGAGCGGTAGTTTCTCTAGTATAAAAACAGAGGACCTTCTCGAAGAAGTTAATCATGAATCAGAAGAACACTACCGCGAAATAGGTCTACAAGTTGTTTCACATTTGAGCAGTGATCTTGAGAATGTGAAGAAAGCGGCAGCATTAGATGCTGATGGCTTGACAAGCACAACAGCTAGATTAGGCTATGGTCTTATAAAAACAAGAGATTTCTTTAAAAACGAACTTGTGAACAACTTAGATAATGATCAAGGGTTCCATGAGATAGTTAAGTGTTTTGTGGAGAAAGCTGAGGTTGATGTCACCGGTTTGTTAGAAGAAGAGAAGAAAATCATGGCTCTTGTAAAGAGTACTGGTGATTACTTTCATGGGAGTACAGGGAGAGATGAAGGATTGAGATTGTTTGTAATAGTACGCGATTTCTTAATAATGTTGGATAAGGTGTGCAGAGAGATTCAAAAAGCACCAAAAAAGCCAATAAAGAATGTAAAACAAGACACAACAGATGCTAATTCTAAAGGGTCATCGAATGTAAAACAAGATGCAACAAATGCTAATTCTAAAGGGTCATCAAATGTAAAACAAGATACAACTAAAGCTAATTCTAAAGGGCCATCAAAGCCGGAAACTCGTCCTCCACCTCCGGATACAACTAAAGCTAATTCTAAAGGGCCATCAAAGCCGGAAACTCGTCCTCCACCTCCGGATATTCGCCAGCGGTTGTTTCCAGCAGTGGTAGAGAGGAGAGTGGATGATTTTAGTTCAGATGATGACAGTCCATAG | 2961 | 0.4086 | MVMIQQYMGVIKSVFCIVLVLNIVAVISIEEKKETEEEFVGKLFDPASEILDEDTAEILCTICMEDLIHVTKDIGDLGLCLPKESHSRTNEVTSEFRSTARENIQNLISTCSPQLKENFLNCLRKHNVPFQDQSKNWITAYEGSGSSRRYPRRVSPRYLAEKQDNDGSSKKDKSDNGSDKSSKKKSKSSDSKNKQHEKAVYNAMAMTAMVMFVIAACTFLCYCRCCGSGRVNQTDERPLLSMSRSDYSVGSSNNNSRISVKEEKHGVQSISSILVEEKKNSMKEDASRPSFDLKPPPGRVGNGKNSMKEDASRPSFDLKPPPGRVGNGIPPLKPPPGRTDPLPPEPPPVKSFDYAVNPPPPPPPPGLQMPSSSGALPPGLPKPGGGGPPPPPPPKLGNSGPKPPPPPPPRGKSGGPRPPPPPKSGAGPPRAPPPFGQKGPRPLPSGPKVQGKVEVSSEGEGEAEADDAPKTKLKPFFWDKVQANSDQTMVWTQLKAGSFQFNEEMMETLFGYSTPSMEKKGGQKKDPSFRDAPPQFTQIIESKKAQNLSILLKALNVTLEEVRDALLEGNELPIEFLHTLIKMAPTSEEELKLRLFSGSLSQLGPADRFLKSLVEIPFAFKRMEVLLYMSTLQEELTSTRDSFSILEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKITLLHFVVQEMMRTEGIRAARMVKESGSFSSIKTEDLLEEVNHESEEHYREIGLQVVSHLSSDLENVKKAAALDADGLTSTTARLGYGLIKTRDFFKNELVNNLDNDQGFHEIVKCFVEKAEVDVTGLLEEEKKIMALVKSTGDYFHGSTGRDEGLRLFVIVRDFLIMLDKVCREIQKAPKKPIKNVKQDTTDANSKGSSNVKQDATNANSKGSSNVKQDTTKANSKGPSKPETRPPPPDTTKANSKGPSKPETRPPPPDIRQRLFPAVVERRVDDFSSDDDSP | 986 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g02669 | 986 | PANTHER | FORMIN-RELATED | 126 | 885 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 886 | 986 | - | - | |
Vifa1g02669 | 986 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 534 | 893 | - | - | |
Vifa1g02669 | 986 | SMART | it6_source | 463 | 886 | IPR015425 | - | |
Vifa1g02669 | 986 | Pfam | Formin Homology 2 Domain | 466 | 871 | IPR015425 | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 968 | 986 | - | - | |
Vifa1g02669 | 986 | Coils | Coil | 545 | 565 | - | - | |
Vifa1g02669 | 986 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 463 | 897 | IPR015425 | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 243 | 470 | - | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 455 | 470 | - | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 891 | 931 | - | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 158 | 196 | - | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 381 | 441 | - | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 243 | 257 | - | - | |
Vifa1g02669 | 986 | MobiDBLite | consensus disorder prediction | 324 | 371 | - | - | |
Vifa1g02669 | 986 | Gene3D | Formin, FH2 domain | 468 | 912 | IPR042201 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g02669 | Vifa-Chr1 | 419201096 | 419206058 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g02669 | 447 | 879 | FH2 protein (formin) Gene Family | AT5G67470 | 48.655 | 8.59e-120 | 386 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g02669 | - | - | gmx:100792872 | 692.96 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g02669 | 1 | 419201096 | 419206058 | Vifa1g02669 | 1 | 419201096 | 419206058 | ECH | |
Vifa1g02669 | 1 | 419201096 | 419206058 | Vifa6g01786 | 6 | 679696653 | 679700856 | PCT |