Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02668 ATGGCAGGAGTTGCACCAGAGGGTTCTCAGTTTGATGCTAAACAATTTGATACCAAAATGAATGAGTTACTCACCACCGAAGGACAGGACTTCTACACCTTTTATGAGGAGGTTTTTGAAAGTTTTGATTCAATGGGCTTGCAAGAGAACCTTCTCAGAGGCATTTACGCATATGGTTTTGAGAAGCCATCAGCTATTCAGCAACGTGGAATAGTTCCATTTTGCAAGGGACTTGATGTTATACAACAAGCTCAGTCTGGAACAGGGAAGACTGCGGTTCTGTCTGAGCTAGAGCTTTTGATTATCAAAGTCAAGGTTTCCACTACACCCGATGGCAAAGTCTTGGATCTGTTTTTTTATCATAGATACCAGAGATCTTCTACATACAAAGACGAGAAAGGATGA 405 0.4148 MAGVAPEGSQFDAKQFDTKMNELLTTEGQDFYTFYEEVFESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTAVLSELELLIIKVKVSTTPDGKVLDLFFYHRYQRSSTYKDEKG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02668 134 Gene3D - 7 104 IPR027417 -
Vifa1g02668 134 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 40 68 IPR014014 GO:0003724
Vifa1g02668 134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 102 IPR027417 -
Vifa1g02668 134 PANTHER RNA HELICASE 27 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02668 Vifa-Chr1 418980763 418981687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02668 1 105 Eukaryotic Initiation Factors Gene Family AT3G13920 73.874 1.23e-49 161