Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02661 ATGAAACTAAAATTTTGCTTACTATTGTTTCTGTTTGTAGAGTGTGTTTTTTTCAAAGTGCAATGCAAATGTGTGAAGGGGTGTGATATAGCTTTAGCTTCCTACTATGTAAAACCTGCATTTATATTCCAAAATATAACAAACTTTATGCAATCAAAGATTGTGTCAGTGTCCCATTCTTCTGAAATTATAATCAGATACAATAAAGATATAGTATCCAATCATGGTGATCTTTTTTCCCTATTTAGAGTCAACATTCCATTTCCATGTGATTGTATTGGAGGTGAATTTTTGGGACATGTGTTTGAATACACAGCAAATAAAGGAGATACTTTTGATTTGATTGCAAATTATTATTATGTAAGTTTGACTTCGGTTGAACTTTTGCAAAAGTTCAACAGCTATGATCCAAATAATATACCTATTAAGGAAAAGGTTAATGTCACTGTCAACTGTTCTTGTGGGAACAGCCAGGTTTCAAAAGATTATGGCTTGTTTGTTACTTATCCACTAAGGTCTTCGGATACTCTTGAGAAGATTGCAAGGCAATCTAATCTTGATGAAGGGTTGTTACAAAGTTACAATTCTGGTGTCAATTTCAGCAAAGGGAGTGGGATAGTGTTTATTCCAGGAAGAGATCAAAATGGAGATTATGTTTCCTTGTATCCTAGAATAGGTTTGCCCTTCTAA 690 0.3348 MKLKFCLLLFLFVECVFFKVQCKCVKGCDIALASYYVKPAFIFQNITNFMQSKIVSVSHSSEIIIRYNKDIVSNHGDLFSLFRVNIPFPCDCIGGEFLGHVFEYTANKGDTFDLIANYYYVSLTSVELLQKFNSYDPNNIPIKEKVNVTVNCSCGNSQVSKDYGLFVTYPLRSSDTLEKIARQSNLDEGLLQSYNSGVNFSKGSGIVFIPGRDQNGDYVSLYPRIGLPF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02661 229 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 5 213 IPR044812 GO:0019199|GO:0045087
Vifa1g02661 229 Pfam LysM domain 104 145 IPR018392 -
Vifa1g02661 229 ProSiteProfiles LysM domain profile. 102 148 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02661 Vifa-Chr1 418282045 418282942 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02661 1 218 Receptor kinase-like Gene Family AT3G21630 44.545 2.44e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02661 - K13429 tpra:123921801 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02661 1 418282045 418282942 Vifa1g02659 1 418088156 418090933 PCT