Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g02659 | ATGAAACTAAAAAATGGGTTACTATTGTTTCTGTTTGTGGAGTGTGCTTTTTTCAAAGTGGACTCAAAGTGTGTGAAAGGGTGTGATATAGCTTTAGCTTCTTACTATGTCATGCCTTTAGTTGATCTCCCAACTATAACAAATTTCATGCAATCAAAGATTGTTACCAACTCTTCTAATGTTTTAAATAGTTACAATAAAGTCTTAGTAACCAATCATGGTAATATTTTTTCCTATTTTAGAATCAACATTCCATTCCCATGTGAATGTATTGGAGGTGAGTTTTTAGGACATGTGTTTGAATACACAACAAAGAAAGGAGATACTTATGATTTGATTGCAAATAATTATTATGTAAGTTTGACTAGTTTTGAGCTTTTGAAAAAGTTCAATAGTTATGATCCAAATCATATACCTGCTAAGGCTAAGGTTAATGTCACTGTCAATTGTTCTTGTGGGAATAGCCAGATTTCAAAAGACTATGGATTGTTTGTTACTTATCCGTTAAGGTCTATGGATACTCTTGAGAAGATTGCGAACGAGTCTAAACTAGATGAAGGGTTGATACAGAATTTCAATCCTGATGTTAATTTCAGTAGAGGAAGTGGGATAGTGTTCATTCCAGGAAGAGATAAAAATGGAGAATATGTTCCTTTGTATCCTAGAACAGGTTTTGCTAAGGGTGCAGCTGTTGGTATATCGATAGCAGGAGTATTCGGGCTTCTATTATTTGTTATTTGTATATATGTCAAATACTTCCAGAAAAAGGAAGAAGAGAAAACTATACTGCCCCAAATTTCTAAGGTGCTTTCAACTCAAGATGGTAGTGGAGAATATGAAACTTCAGGATCTAGTGGGTATGGTACTGGTAGTGCTGCTGGGCTTACAGGAATTATGGTGGCAAAGTCAACAGAGTTTTCATATCAAGAACTAGCTAAGGCTACAAATAACTTTAGTTTGGATAATAAAATTGGTCAAGGTGGTTTCGGAGCTGTCTATTATGCCGAACTCAGAGGCGAGAAAACAGCAATTAAGAAAATGAATGTACAAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCATTTGAATCTGGTGAGGTTGATTGGATATTGTGTTGAGGGATCGCTTTTCCTTGTATACGAACATATTGACAATGGAAACTTGGGTCAATATTTGCATGGTTTAGGTAAAGAGCCATTACCATGGTCTAGTAGAGTCCAAATTGCTCTAGATTCTGCAAGAGGCCTTGAATACATTCATGAACACACTGTGCCAGTTTATATCCATCGCGATGTAAAATCAGCAAACATATTGGTAGACAAAAACTTGCGGGGAAAGGTTGCAGATTTTGGCTTGACCAAACTTATTGAAGTTGGAAACTCCACACTTCACACTCGTCTTGTTGGAACTTTTGGATACATGCCACCAGAATATGCTCAATATGGTGACGTTTCTCCGAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTAATTTCTGCAAAGAATGCTGTTCTGAAGACAGGTGAAGTATCGGTTGCTGAATCAAAGGGTCTTGTAGCCTTGTTTGAAAAAGCACTTAATCAAATTGATCCTTCAGACGCTCTTTGCAAATTGGTGGATCCTAGGCTTAAAGAAAACTATCCAATTCATTCTGTTTTAAGGATGGCTGAACTTGGGAGAGCATGTACAAGAGACAATCCACTACTACGCCCAAGTATGAGATCTTTAGTTGTTGATCTCATGACACTTTCATCACCATTTGAAGATTGTGATGATGACAACTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTGCGATGA | 1854 | 0.3646 | MKLKNGLLLFLFVECAFFKVDSKCVKGCDIALASYYVMPLVDLPTITNFMQSKIVTNSSNVLNSYNKVLVTNHGNIFSYFRINIPFPCECIGGEFLGHVFEYTTKKGDTYDLIANNYYVSLTSFELLKKFNSYDPNHIPAKAKVNVTVNCSCGNSQISKDYGLFVTYPLRSMDTLEKIANESKLDEGLIQNFNPDVNFSRGSGIVFIPGRDKNGEYVPLYPRTGFAKGAAVGISIAGVFGLLLFVICIYVKYFQKKEEEKTILPQISKVLSTQDGSGEYETSGSSGYGTGSAAGLTGIMVAKSTEFSYQELAKATNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMNVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEHIDNGNLGQYLHGLGKEPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILVDKNLRGKVADFGLTKLIEVGNSTLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKNAVLKTGEVSVAESKGLVALFEKALNQIDPSDALCKLVDPRLKENYPIHSVLRMAELGRACTRDNPLLRPSMRSLVVDLMTLSSPFEDCDDDNSYENQTLINLLSVR | 617 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g02659 | 617 | FunFam | PTI1-like tyrosine-protein kinase 3 | 389 | 603 | - | - | |
Vifa1g02659 | 617 | SMART | serkin_6 | 318 | 591 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g02659 | 617 | ProSiteProfiles | LysM domain profile. | 100 | 146 | IPR018392 | - | |
Vifa1g02659 | 617 | Pfam | LysM domain | 102 | 140 | IPR018392 | - | |
Vifa1g02659 | 617 | ProSitePatterns | Protein kinases ATP-binding region signature. | 324 | 346 | IPR017441 | GO:0005524 | |
Vifa1g02659 | 617 | FunFam | LysM receptor kinase 2 | 297 | 388 | - | - | |
Vifa1g02659 | 617 | ProSiteProfiles | Protein kinase domain profile. | 318 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g02659 | 617 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 388 | - | - | |
Vifa1g02659 | 617 | Gene3D | Transferase(Phosphotransferase) domain 1 | 389 | 612 | - | - | |
Vifa1g02659 | 617 | SUPERFAMILY | Protein kinase-like (PK-like) | 300 | 590 | IPR011009 | - | |
Vifa1g02659 | 617 | Pfam | Protein tyrosine and serine/threonine kinase | 319 | 588 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa1g02659 | 617 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 8 | 603 | IPR044812 | GO:0019199|GO:0045087 | |
Vifa1g02659 | 617 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 433 | 445 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g02659 | Vifa-Chr1 | 418088156 | 418090933 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g02659 | 7 | 617 | Receptor kinase-like Gene Family | AT3G21630 | 53.485 | 0.0 | 625 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Vifa1g02659 | PK_Tyr_Ser-Thr | 7.2e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g02659 | - | K13429 | tpra:123921801 | 1044.26 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g02661 | 1 | 418282045 | 418282942 | Vifa1g02659 | 1 | 418088156 | 418090933 | PCT |