Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02656 ATGGTTGGTACTCCAATGAATGGAAGAAGACTCTCTTTTGGATTTGGAAATGGTGGACATGAACTTGGTCCAAGTAGTACTCCACCAAGTAATGCTGGTTCTGATTATGGAAGCTTTGTAGATTTCACAAGAGATGATGTTGAGGCTTTGCTTAACGAGAAATCCAAAAGGAAAGACAGATTTAATTACAAGGAAAGATGTGAAAATATGATTGATTATATAAAAAGGCTTAAGGTTTGTATTAGATGGTTCCAAGACCTTGAATTGAGCTACTCATTAGAGCAAGAGAAGTTAAAGAGTTCATTGGAGTTGTCTCAACAAAAATGCATGGAAATAGAGTTGCTGCTAAAAATCAAGGAAGAAGAACTGAATTCGATTATTACAGAAATGAGAAGGAATTGCACTTCTTTGCAAGAGAAATTAGTGAAGGAAGAAACTGATAAATCGGCTGCAATGGAATCTCTTGTTAAAGAGAGAGAGGCTAGGCTTGACTTTGAAAGGTCGCAAACTACGTTATCAGAAGATCTTGGTAGAGCTCAACGAGAGCTTCAAACTGCGAATCAGAAGATATCATCACTCAATGACATGTATAAGCGATTACAAGAGTATATAACAAGCTTGCAGCAATACAATGGAAAACTTCATTCTGAGCTTTCTTCGGTTGAAGGTGATCTTAAGCGTGTAGAGAAAGAGAAAGCGACCGTAGTGGAAAATCTTACCATGTTGAAGGGCCAGCTTACTTTGTCTATGGCTTCTCAAGAAGAGGCTACAAAACAGAAGGATGCTTTTGCGAGTGAAGTTACATCCCTTCGAAGCGAGCTGCAACAAGTGAGGGACGATCGTGATCGCCAAATATCTCAAGTGCAAACTTTAAGTACTGAAATAGTCAAGTTTAAAGATTCTTCAGAAAAGTCCGGTTCCGAACTGAACAACTTGACCATGAAAACAAAGGAATTGGAGACAAAATGTACTTTTCAAGATAATCATATAATGGAATTACAAGAGAAGCTAACGATTGCAGAGAACAAACTCGAGGTTTGTGATATATCTGCTATTGAGACAAGAACAGAATTCGAAGGGCAACAGAAACTCGTAAATGAGTTACAAAGACGATTGGCAGATGCAGAATACAAACTTATACAAGGGGAGAAGCTGCGGAAAGAATTACATAATACTATTTTGGAACTGAAAGGGAACATTCGCGTGTTCTGTAGAGTGCGGCCTTTGTTACCTGAGGAAGGTTGTAGCACAGATGGAAAGATTATATCATATCCTACCTCGATGGAAGCTTCCGGACGAGGCGTTGAATTGGCACAAAATGGACAAAAACACTCTTTCACATTTGATAGAGTTTTTGCACCGGATGCGTCACAACAAGAAGTATTTACAGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTCGCGTATGGTCAGACAGGTTCGGGGAAAACCTATACAATGATGGGCAGGCCTGGGCATCCCGGCGAAAAGGGCTTGATACCACGTTCGCTCGAACAAATATTTCAAACTAAACAGTCTCAACAACCACAAGGATGGAAATACGAAATGCAGGTGTCAATGTTGGAAATATACAATGAAACGGTTCGTGATTTGTTGTCTACAACAAATAAGTCAGCATCAGATGCAACCCGAGTAGAAAACGGTACTCCTGGGAAGCAATATTCAATCAAACATGATGCCAGCGGAAATACACACGTTTCTGATCTTACAGTTGTTGATGTTCAGAGCGTAAAAGAGGTCGCATTTCTTTTAAACCAAGCAGCAAACAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCAAGAAGTCATTTCGTATTCACTCTTCGAATATACGGTGTAAACGAGAGCACTGACCAACAAGTACAAGGCATTCTAAACCTCATCGATCTTGCCGGGAGTGAACGTCTTTCAAGGAGCGGCTCAACCGGAGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTTTGTCGTCATTAAGCGATGTTATATTCGCCTTGGCCAAGAAGGAAGATCACATTCCATTCAGAAACTCAAAGCTTACGTACCTACTTCAGCCTTGTTTAGGTGGAGACTCAAAGACATTAATGTTTGTAAACATCTCTCCCGATCAAGCTTCATCCGGAGAGTCGCTATGCTCACTCCGGTTCGCATCAAGAGTAAACGCTTGTGAAATTGGCACGCCTCGTCGCACCACCACCAACGGCCGTCCAGCAGAATCGCGCCTGAGCTATTTCTAA 2289 0.4072 MVGTPMNGRRLSFGFGNGGHELGPSSTPPSNAGSDYGSFVDFTRDDVEALLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLELSYSLEQEKLKSSLELSQQKCMEIELLLKIKEEELNSIITEMRRNCTSLQEKLVKEETDKSAAMESLVKEREARLDFERSQTTLSEDLGRAQRELQTANQKISSLNDMYKRLQEYITSLQQYNGKLHSELSSVEGDLKRVEKEKATVVENLTMLKGQLTLSMASQEEATKQKDAFASEVTSLRSELQQVRDDRDRQISQVQTLSTEIVKFKDSSEKSGSELNNLTMKTKELETKCTFQDNHIMELQEKLTIAENKLEVCDISAIETRTEFEGQQKLVNELQRRLADAEYKLIQGEKLRKELHNTILELKGNIRVFCRVRPLLPEEGCSTDGKIISYPTSMEASGRGVELAQNGQKHSFTFDRVFAPDASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETVRDLLSTTNKSASDATRVENGTPGKQYSIKHDASGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASSGESLCSLRFASRVNACEIGTPRRTTTNGRPAESRLSYF 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02656 762 Coils Coil 358 385 - -
Vifa1g02656 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 738 IPR027417 -
Vifa1g02656 762 CDD KISc_C_terminal 397 742 - -
Vifa1g02656 762 Pfam Kinesin motor domain 405 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 Coils Coil 169 203 - -
Vifa1g02656 762 Coils Coil 120 147 - -
Vifa1g02656 762 PRINTS Kinesin heavy chain signature 690 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 PRINTS Kinesin heavy chain signature 641 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 PRINTS Kinesin heavy chain signature 610 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 SMART kinesin_4 397 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 Gene3D Kinesin motor domain 341 742 IPR036961 -
Vifa1g02656 762 SUPERFAMILY Tropomyosin 209 390 - -
Vifa1g02656 762 PANTHER KINESIN-LIKE PROTEIN KLP-3 253 747 IPR027640 GO:0003777|GO:0007018
Vifa1g02656 762 ProSiteProfiles Kinesin motor domain profile. 399 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa1g02656 762 Coils Coil 225 245 - -
Vifa1g02656 762 FunFam Kinesin-like protein 345 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02656 Vifa-Chr1 417949901 417954129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02656 84 737 Calmodulin-binding Proteins AT5G65930 31.777 8.22e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02656 K10405 - gmx:100801196 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02656 1 417949901 417954129 Vifa6g01762 6 673097821 673101903 PCT