Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02607 ATGGATCCTAATCAATTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCATAATCCTCAAAATTCTCAAATTCCATCGATGCCAACAAACCCCGCCATATTTTTTCCATCACCAAACAATCCAAATATGTATCATATACCTCAAATGAATTCTAATAGTATGGAATTTTCTACCCAAGTTCCACCATTTTCTACTCAAGTTGGTACTCAAGTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAGGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGTTAAGAATAGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGGGGGCAATTAAAATGCCGATGGCATAGAATAAATGGTTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCAGATAACGATATCATGGCCTCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAGTAACAAAGACTTCTGCTAGTGGGGCATCATCGGCTAACTCAGATACACCTTCAAGTTACGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGACAAAGGAAATTCCAAATGCAACACAAGATGCAAGGAATAAAAGAGCAGCAGCAATGGAAAGACTAGCTCAAAGTAAGGAGGACGAGCTAGAATTAAAGGCAATGCAAATCATCATGAAAGACACTTCTACTATGAGTGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAATAA 954 0.3679 MDPNQFHYQQAMFNFMQNYQNHNPQNSQIPSMPTNPAIFFPSPNNPNMYHIPQMNSNSMEFSTQVPPFSTQVGTQVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSDNDIMASAHAFFAQDEGTTFNLEYAWRLLKDEPKWMGESIGNSSKVTKTSASGASSANSDTPSSYEFNSSSPMERPMGQKAAKRKGKTKEIPNATQDARNKRAAAMERLAQSKEDELELKAMQIIMKDTSTMSDSQRDIHEKYCNKMKK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02607 317 PANTHER - 58 316 - -
Vifa1g02607 317 MobiDBLite consensus disorder prediction 296 317 - -
Vifa1g02607 317 MobiDBLite consensus disorder prediction 208 243 - -
Vifa1g02607 317 MobiDBLite consensus disorder prediction 246 282 - -
Vifa1g02607 317 MobiDBLite consensus disorder prediction 301 317 - -
Vifa1g02607 317 Coils Coil 263 283 - -
Vifa1g02607 317 Pfam No apical meristem-associated C-terminal domain 187 306 IPR029466 -
Vifa1g02607 317 MobiDBLite consensus disorder prediction 206 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02607 Vifa-Chr1 409576816 409577769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02607 78 255 Glutathione S-transferase Gene Family AT5G41240 34.737 1.49e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02607 - - psat:127115199 502.286