Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02605 ATGGACTACCTTTTTGGATTTGCGTCTTCCCTTTCAAGAGATTTGGTGTGCGGTTTAATAGGTGAATTAAGTTATCCCTGCTGCTTCAACAATTTTGTTCAAGATGTCGTAAAAGAAGAAGGTAATTTGACTGTAACAAGAGATAGTGTCCAAGAACGTGTTACACGAGCCAAGAAGCAAACTAGAAAGACCGCTGAGATTGTTGAGAAGTGGTTGAAGGATGCTAACATTGTCATAGGCAATGTTGATCAGTTACTACAAATGGCAAAAACAGAAAATAACTATTGTCTTGGGCACTGTCCAAATTGGATTTGGCGATACCGTGTAGGCAGAAAGTTATCAAAGAAAAAAAGGGACCTTAAATTGTGCATTGAAGAAGGTAGACGATATATACAGATGGAATGGCCTGCTTCACTTCCAGCAGGCTTTTTTTCTTCTGAAAAATGCTTGGATTTTGATAGTAGAAAACCTGCTTATGAAGAACTTACACGTGCTTTTGGAGATGATGAGGTTACTATGATTGGATTGTATGGGATGGGGGGTTGTGGAAAAACAATGCTTGCAATGGAAGTAGGCAAGAGATGCGGCCATCTTTTTGATCAAGTGCTTTTTGTGCCTGTATCTAGTACTGTGGAAGTGGAAAGGATCCAAGAAAAAATTGCAGGCTCTCTTGAATTTGAATTCCAAGAAAAAGACGAAATGGACCGATCACAACGGTTATGCATGAGGTTAACACAGGAAGATAGGGTTCTTGTGATTCTGGATGATGTGTGGCAAATGTTAGATTTTGATGCCATTGGGATTCCTTGTAGTGAACATCATAAAGGTTGCAAGGTTCTCATTACCAGTAGATCTGAAGCAGTTTGTACTTTGATGGATTGCCAGAAAAAAGTTCATCTATCAACACTAACCAACGATGAAACGTGGGATCTTTTCCAAAAGCAAGCATTCATATCTGAAGGAACATGGAATACTCTAAAGAATTTGGCTAAAGAAATTTCAAATGAATGTAAAGGTTTGCCTGTTGCCACTGTAGCTGTCGCTAGCAGCTTGAAAGGCAAGGCTGTGGTGGAATGGAAGGTTGCATTGGATAGATTGAGAAGTTCGAAGCCTGTTAATATTGAAAAAGGTTTGCAAAACCCGTACAAGTGCTTGCAGTTAAGCTATGATAATTTGGACACTGAAGAGGCCAAGTCACTTTTCTTGTTGTGTTCTGTGTTTCCTGAAGATTGTGAAATTCCCGTGGAGTTTTTGACTAGGTCTGCAATAGGGCTAGGCATAGTTGGAGAAGTTCGCTCATATGAAGGGGCTAGGGATGAAGTGACTGCGGCTAAAAATAAGCTCATAAGTTCTTGTTTGTTGCTAAATGTTGATGAAGGAAAATGTGTTAAAATGCACGACTTAGTTCGTAATGTAGCCCATTGGATTGCAGAGAATAAGATTAAGTGTGCCTCAGAAAAGGATATTATGACTTTGGAACATACTCCATTAAGATATCTATGGTGTGAGAAATTTCCAATTAATTTGGATTGTTCCAATCTCGACTTTCTACACATTCACACAGATACACAAGTATCAGATGAATTTTTCAAAGGAATGAGAATGCTCAGAGTTTTGTTTCTTTACAACAAGGGTCGGGAGAGAAGGCCATTGTTGACTATATCATTAAAATCGTTGACAAATCTTCGTTGCATACTTTTGAGTAAATGGGATTTAGTTGACATCTCATTTGTGGTAGAATTGAAGAAACTTGAAAGTCTTACATTGTGTGATTGTTCATTCTTTGAAATACCTGATGTGGTTACACAATTGACATACTTGAAATTGTTGGATTTGTCAGAATGTGACATGAAAATGAATCCGTTTGAAGTGATTGGGAGACACACACAGCTGGAAGAACTGTACTTTGCTGACCGTAGATCAAAATGGGACGTCGAATTCTTAAAAAATTTTAGGGTCCGCCAAGTGTTACAGAGGTATCGGATACAATTAGGAAGCATGTTTGCCGGTTTCCAAGAAGAGTTTCTCAATCATCACAGAACTTTGTTTCTCAGTTATTTGGATGCTTCTAATGGAACGATCAAGGATTTGGCAGAAAAGGCAGAGGTCTTGTGTATAGCAGAGGTAGGAACTCTCTTCTGCAAGTTGCATTGGCTAAGAATTGAGCACATGGAGCATTTGAGAGCTTTATACAATGGTCGAATGCCTCTTGGTGGACATTTTGGGAATTTAGAAGACCTATATATAAGTCATTGTCCAAAGCTAACATGTCTCTTCACACTTGCAGTTGCTCAAAATCTGGCAAAGCTGGAGAAATTACAAGTATTATCTTGCCCTGCACTTAAGCATATACTAATCGATGATGATAAAGAGGAAATAGTTAGTGCTTACGATCACAGGCTACTGTTGTTTCCAAAATTGAAAAGGCTTCATGTTAGAGAGTGTGATGTGCTGGAATACATAATCCCAATCACTTTCACTCAAGGCCTTGTACAGTTGGAGTGTTTGGAAATTGTGTGTAATATTAAGTTGAAATGTGTATTTGGCCTAAGCTCACACCAAGATGGTCAGAATCAAAATGAACTCAAGATCATCGAGCTTTCGGCATTGGAAGAGCTTACTCTTGTTATGTTGCCAAATATTAATAGCATTTGTCCAGAAGATTGTTATCTAATGTGGCCATCCTTGCTTCAATTCAACTTGCAAAACTGTGGAGAGTTTTTCATGGATTATCCGTTGATGGAGAAAAAGATCCACCGACATCATGCTTGGAAATGTTGTATTTGGATAATCTACCTCAGCTCAGGAGGGCTTCCTCAATTGAAAGCACTAAAGATAGAAAAGTGCAATCAGCTAGATCGAATCGTTGATGATATTGGCACCTCAACTCCCTTAGGATTATTTGGTCTCCCCAGCCTTGTAAGGTTAACACTAATATCATGTCCCATGCTGGGTTCGTTGTTCACAGCATCCACTGCCAAAACCTTGACTTCATTGGAAGAATTGACAATACAAGATTGCCATGGTTTAAAGGAACTGGTAACATATGGAAGGGCTCAAAAAAATAGAAGGGGAGAAATAGTTGAGGATCATCATCACGACTTTCAGAGTTATACGTCAATGTTCGAAAGTTTGAAAAAGATTAGTATTATGAGATGTCATTTGCTGAAATGTATATTGCCGGTTACATTTGCAAGAGGACTGGTGAAATTGGAAGATATAGAAATCACAGATACTCCTGAGTTGAGATATGTATTTGGTCATTCTTCTCCTCAGTATCCAAACGGGTTCCAAATTGAGCTTCCTGTTTTGGAAAAAGTTGTACTCTCCAACATACCAAATATGACTGCAATTTGTCCAGAAAACTACCATGCAACATGCTCGTCTTTGCAACTTCTTGTCATGAACGATGTTGGCCTATCAATCAATAATTTGATAGTTGATTCAGATCTTAGTTCTAAAACAGATGAAGGAGAAACAATCATGAGTACTGAGAAGAAGTTAATATCTGTTACTATAGAGAACGGATCTGAAATTGAAGGCATTTTTCAAATGAAGGGATTCCCAAGTGAGAATGGACAACAAGTGATGACCTGGATAGAAGACCTTAAATTGGTCAATTTGCCAGAGCTAATGTACATATGGGAAGGTGCCAAACATTTTATCCTAGTGGTAGAACAGTGCGAGGAATTGGAGCAAATCATTGAAGATGAAGAAGAAAATGAAAATGTCCCAAATCCTCAAGTGTGCTTCCCACAGCTAAAGTTTCTTCTTGTCACACACTGCAACAAATTGAAGCATTTGTTCTATATCCCCACATCCCATGAGTTTCCAGAATTGGAACATGTAATGTTAATGCAACTGCCAAACCTCAATAATATATGTCAAGGGATTGTTGAGTTTCAGACTCTGACCAATCTTTTGGTGCACAATTGCCCGAAATTCTCACTAACTTCGACGACTACTATTGAGGACATGCTACAAACCTATGATTATGACAACGAAATCGGTTTCTATCTCTGTCCATACTTACACGACATAGGTTCTACAAATGGTCATGAGTTCCTTACATCAAAGAACAAAAACAAAGAGATACAAGATTTACAATCACAGGAGCAGAATCTGTCACCCATTTATTTACCAAACTCGACAGAGGAGTTGTTTAAAGGACAAACAATGGATGAACCATGTTTGATGAGGCAACAAAAGGCACTTGGAGAATCTAGGGTTATTGAAAAGGGAATAGAATTAGAGAGTGCGGAGATATTAGCTTTGTCAATTCATTCTGAATCTGATAGCTCGCATTCAAGCCCACTAGCTACCTCTCAATGTAGCCCTCATCCTCTATATGAAATTGGCTTCACTCGAACTGAGACTTACATTAATGAAGAAAACAAAGGCCATCCTATAAACCTAGGAGGAGACTTGGAGGCCAATGATCTCAATCCCGTGGAAGAGGATGATAAAGGCCAAATAACCGCACCCCGTGTTTCTGAAGTGACTACTGATAACTTGGTTACACAGACTCTTTCTGACCTGGAAGAGTGTTTAAGCATATCTCTGAAAGACATAGCTAGCTCAGAGACTAACAGCCTTCGCCTTCTAACCGCTCTCAACTTCTTGTCCCACCTTTCTTTAAAAGATGTAGCACTATCAGACGAACTCCGAGCTATAATAGACACAATGCACACAGAATTCCCAACCATCCTATGCTCCTTCAAGCAAGCCTTTATTACCATAGACAAATTTGCTGTGATTGAAGCTCATCACGACAAGGCAGCAATTACTCTTTCTTCCAAAATTTCCAAAGCAAAAAGTTTTTTGGATGAAGCTCAACAGAGGGAAGCAGCTTTAAAGGAAAAGATCATTCAATTGGAGAAAGAAATAAAATATCTTCAAGAGGAAAAGGACAAATGCAATCAAGAAACTCTAGGCTACAAAATGGAGTTGGAGAATGTGAAGAAAGACAAGTATCAACATGTGCAAGATCAAATAAAAGCTCGGCAACAAATATTTGAGGTTGATTATAAATGGTCTGCTCTACTTAGTCAGTTTCGGTACAAGCACAGTGTTGCAAGAAATTTTTCATGA 5091 0.3875 MDYLFGFASSLSRDLVCGLIGELSYPCCFNNFVQDVVKEEGNLTVTRDSVQERVTRAKKQTRKTAEIVEKWLKDANIVIGNVDQLLQMAKTENNYCLGHCPNWIWRYRVGRKLSKKKRDLKLCIEEGRRYIQMEWPASLPAGFFSSEKCLDFDSRKPAYEELTRAFGDDEVTMIGLYGMGGCGKTMLAMEVGKRCGHLFDQVLFVPVSSTVEVERIQEKIAGSLEFEFQEKDEMDRSQRLCMRLTQEDRVLVILDDVWQMLDFDAIGIPCSEHHKGCKVLITSRSEAVCTLMDCQKKVHLSTLTNDETWDLFQKQAFISEGTWNTLKNLAKEISNECKGLPVATVAVASSLKGKAVVEWKVALDRLRSSKPVNIEKGLQNPYKCLQLSYDNLDTEEAKSLFLLCSVFPEDCEIPVEFLTRSAIGLGIVGEVRSYEGARDEVTAAKNKLISSCLLLNVDEGKCVKMHDLVRNVAHWIAENKIKCASEKDIMTLEHTPLRYLWCEKFPINLDCSNLDFLHIHTDTQVSDEFFKGMRMLRVLFLYNKGRERRPLLTISLKSLTNLRCILLSKWDLVDISFVVELKKLESLTLCDCSFFEIPDVVTQLTYLKLLDLSECDMKMNPFEVIGRHTQLEELYFADRRSKWDVEFLKNFRVRQVLQRYRIQLGSMFAGFQEEFLNHHRTLFLSYLDASNGTIKDLAEKAEVLCIAEVGTLFCKLHWLRIEHMEHLRALYNGRMPLGGHFGNLEDLYISHCPKLTCLFTLAVAQNLAKLEKLQVLSCPALKHILIDDDKEEIVSAYDHRLLLFPKLKRLHVRECDVLEYIIPITFTQGLVQLECLEIVCNIKLKCVFGLSSHQDGQNQNELKIIELSALEELTLVMLPNINSICPEDCYLMWPSLLQFNLQNCGEFFMDYPLMEKKIHRHHAWKCCIWIIYLSSGGLPQLKALKIEKCNQLDRIVDDIGTSTPLGLFGLPSLVRLTLISCPMLGSLFTASTAKTLTSLEELTIQDCHGLKELVTYGRAQKNRRGEIVEDHHHDFQSYTSMFESLKKISIMRCHLLKCILPVTFARGLVKLEDIEITDTPELRYVFGHSSPQYPNGFQIELPVLEKVVLSNIPNMTAICPENYHATCSSLQLLVMNDVGLSINNLIVDSDLSSKTDEGETIMSTEKKLISVTIENGSEIEGIFQMKGFPSENGQQVMTWIEDLKLVNLPELMYIWEGAKHFILVVEQCEELEQIIEDEEENENVPNPQVCFPQLKFLLVTHCNKLKHLFYIPTSHEFPELEHVMLMQLPNLNNICQGIVEFQTLTNLLVHNCPKFSLTSTTTIEDMLQTYDYDNEIGFYLCPYLHDIGSTNGHEFLTSKNKNKEIQDLQSQEQNLSPIYLPNSTEELFKGQTMDEPCLMRQQKALGESRVIEKGIELESAEILALSIHSESDSSHSSPLATSQCSPHPLYEIGFTRTETYINEENKGHPINLGGDLEANDLNPVEEDDKGQITAPRVSEVTTDNLVTQTLSDLEECLSISLKDIASSETNSLRLLTALNFLSHLSLKDVALSDELRAIIDTMHTEFPTILCSFKQAFITIDKFAVIEAHHDKAAITLSSKISKAKSFLDEAQQREAALKEKIIQLEKEIKYLQEEKDKCNQETLGYKMELENVKKDKYQHVQDQIKARQQIFEVDYKWSALLSQFRYKHSVARNFS 1696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02605 1696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 404 IPR027417 -
Vifa1g02605 1696 SUPERFAMILY L domain-like 459 848 - -
Vifa1g02605 1696 Gene3D - 302 387 IPR042197 -
Vifa1g02605 1696 Gene3D - 145 299 IPR027417 -
Vifa1g02605 1696 FunFam Probable disease resistance protein At1g61300 153 297 - -
Vifa1g02605 1696 Gene3D Ribonuclease Inhibitor 920 1024 IPR032675 -
Vifa1g02605 1696 Coils Coil 1601 1642 - -
Vifa1g02605 1696 SUPERFAMILY RNI-like 931 1140 - -
Vifa1g02605 1696 Gene3D - 388 474 IPR036388 -
Vifa1g02605 1696 Pfam NB-ARC domain 168 391 IPR002182 GO:0043531
Vifa1g02605 1696 PRINTS Disease resistance protein signature 337 351 - -
Vifa1g02605 1696 PRINTS Disease resistance protein signature 244 258 - -
Vifa1g02605 1696 PRINTS Disease resistance protein signature 602 618 - -
Vifa1g02605 1696 PRINTS Disease resistance protein signature 173 188 - -
Vifa1g02605 1696 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 832 1119 - -
Vifa1g02605 1696 Gene3D Ribonuclease Inhibitor 475 904 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02605 Vifa-Chr1 409452863 409460146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02605 170 615 WRKY Transcription Factor Family AT5G45050 22.674 2.77e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02605 - - cam:101501248 2449.85