Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02604 ATGGCTACCTTAACTCATGCATCGGTTATGCTATGTTTCTTGGTTTTGATGCATAAGGGTGATTCCTATGAGTTTGTTGTTGGAGGCCAAAAGGGTTGGAGTGTTCCAAGTGACCCTAATGCTAACCCTTTCAATCAATGGGCAGAAAAGAGTAGGTTTCAAGTAGGAGACTCTCTAGTGTTCAATTACCAATCTGGCAAAGACTCAGTAATTGAAGTAAACAGCCAACAAGACTATGAGAATTGCAACACTGATGCATCATCTTCTGGAAAATCCTCTGATGGTCACACAGTAATCAAACTCGACAAATCCGGTCCTCACTACTTTATAAGTGGAAACAAAGATAACTGTCTCAAGAATGAGAAACTATTGGTGATTGTTCTTGCTGACAGAACCAACAGAAACTCAAACCAAACAGCAACAACTCCTTCTCCTTCTCCTTCTCTTTCTCCTTCTCCATTATCCTCGCACACGTCAGATGCATTGGCTCCTTCACTACCACCTTCTCAGCTAAATGGTTCGTCTCCTCCACCACCTTCTCAGCTAGATGGTTCATCTCCACCACCTCTTCAGCAAGTAGGCTCAGCTCCACCGCTAGGGACTGATGTGACAAATCCTACTACTCCAACTACGTCTCCTGTTTCTGAACCTCCTCCTCCTAATGCTGCTTCTTCAATCTTGCTTAGCTTTGGCTGTTCCGTTGGAGCACTCATGGTTTCACTTCTGGTTTCTTCCAAGTGA 741 0.4399 MATLTHASVMLCFLVLMHKGDSYEFVVGGQKGWSVPSDPNANPFNQWAEKSRFQVGDSLVFNYQSGKDSVIEVNSQQDYENCNTDASSSGKSSDGHTVIKLDKSGPHYFISGNKDNCLKNEKLLVIVLADRTNRNSNQTATTPSPSPSLSPSPLSSHTSDALAPSLPPSQLNGSSPPPPSQLDGSSPPPLQQVGSAPPLGTDVTNPTTPTTSPVSEPPPPNAASSILLSFGCSVGALMVSLLVSSK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02604 246 CDD OsENODL1_like 23 128 IPR041846 -
Vifa1g02604 246 ProSiteProfiles Phytocyanin domain profile. 23 129 IPR003245 GO:0009055
Vifa1g02604 246 FunFam Early nodulin-like protein 1 22 132 - -
Vifa1g02604 246 PANTHER BLUE COPPER PROTEIN 24 148 IPR039391 GO:0009055
Vifa1g02604 246 MobiDBLite consensus disorder prediction 135 169 - -
Vifa1g02604 246 Gene3D - 21 130 IPR008972 -
Vifa1g02604 246 MobiDBLite consensus disorder prediction 170 185 - -
Vifa1g02604 246 MobiDBLite consensus disorder prediction 135 224 - -
Vifa1g02604 246 Pfam Plastocyanin-like domain 33 119 IPR003245 GO:0009055
Vifa1g02604 246 SUPERFAMILY Cupredoxins 22 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02604 Vifa-Chr1 409091481 409092547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02604 10 136 Phytocyanin Superfamily AT3G20570 55.469 2.93e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02604 - - adu:107462411 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02604 1 409091481 409092547 Vifa1g02604 1 409091481 409092547 ECH