Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02591 ATGAGGCCTACCGACTTGCTTAGGGTTCTGAACAAGCAGTTTCTTGGAATCGCCGGCGACACTGCAAATGCTGTTGCTAAGAAGCTGACATCGCCTCCTCCTATTGTGTCCCGCAAACCAGCATTTATAGACACATTTCTGTACAAGATGAAAAAGAATCCAGAACTTCTGAAGAACAAAAGCATTTGGTCACGGAGATCCACTATCTTGCCAGAATTTGTTGATTCCCAGGTCAAGATTTACAATGGGAAAACCATGATTCGTTGTAAGATCACCGAGGGAAAAGTCGGTCATAAGTTTGGTGAGTTTGCTCTCACCAGGAAACGCAAATCTAGAGACCAACCTAATGCCAAAGTGAAACAACTCAAGAAAAAGAAGTGA 381 0.4331 MRPTDLLRVLNKQFLGIAGDTANAVAKKLTSPPPIVSRKPAFIDTFLYKMKKNPELLKNKSIWSRRSTILPEFVDSQVKIYNGKTMIRCKITEGKVGHKFGEFALTRKRKSRDQPNAKVKQLKKKK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02591 126 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 36 121 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 FunFam Ribosomal protein S19, mitochondrial 35 121 - -
Vifa1g02591 126 Gene3D 30s Ribosomal Protein S19; Chain A 35 121 IPR023575 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 SUPERFAMILY Ribosomal protein S19 38 111 IPR023575 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 Hamap 30S ribosomal protein S19 [rpsS]. 6 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 ProSitePatterns Ribosomal protein S19 signature. 82 106 IPR020934 GO:0003723
Vifa1g02591 126 MobiDBLite consensus disorder prediction 106 126 - -
Vifa1g02591 126 PRINTS Ribosomal protein S19 family signature 62 81 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 PRINTS Ribosomal protein S19 family signature 94 109 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 PRINTS Ribosomal protein S19 family signature 82 94 IPR002222 GO:0003735|GO:0005840|GO:0006412
Vifa1g02591 126 Pfam Ribosomal protein S19 47 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02591 36 117 Cytoplasmic Ribosomal Protein Gene Family AT1G04270 28.571 2.98e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02591 K02965 - gmx:100782150 209.534