Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02585 ATGTTAAATAGGCTTCACAGTAGCCTTAAGGTCCTTCTAGTCCTTGACAATGTTGATCAATTAGAGCAATTGCAGGAATTAGAGGTACTAAAATATGCTCAAAATCTTCCATTAGCAATTGAAGTAGTGGGCTCTTTCTTGTGTACTCGAGATGCTACTCAATGGAGAGATGCTCTTGATAGATTGAAGAACAATCCAGACCGTAAAATTATGGACGTGCTCCAGATTAGTTTTGATGGATTACAACATGAGGAGAAGGAAATATTTCTGCACATTGCTTGTTTTTTCAAAGGGGAGAGGGAAGATTATGTAAGGAGAATTCTTGATGCATGTGGATTGTATCCTCACATAGGAATTCAAAGAGTTATTGAGAAGTCCCTCATTACCATTGAAAACCAAGAGATTCATATGCATGATATGTTACAAGAACTGGGGAAGAAAATTGTTCGGGACAGGTTTTTAGACGATCCAGGATTGTGGAGCAGAGTATGGCGATGCAATGATTTCTATCACGTCTTGAAGACAAAAACGGGAACAAACAATAATGTTAAAGCCATAGTTCTGGATCAAAAGGAAAATTTCCCCGAATGCGTGGCCGAAGGATTTTCAAATCTGAGGAACCTTGCACTTCTCATATTGTATCATAACAACTTTTCAGGAAATTTGGATTTTCTTTCCAACAACTTGCGATATCTTTTGTGGCATGGATACGCTTTTACTTCTTTGCCGTCAAATTTTGAGCCACATTATCTTGTGGAATTGAATATGCCTGATAGTAGCATTCAACGGCTGTGGGACGGTCGCAAGGAACTACCTAATTTGAAAAGGATGGATTTGAGCAACTCCAAGTATCTTATAGAGACTCCAAAGTTTTTTTGGACCTCAAAACTGGAGCGGTTAGATTTTACAGGATGCACAAACTTAATACAGGTCCATCCATCAATTGGACATCTTACGGAACTTGTTTTCTTAAGTTTGCAAAACTGCAGCAGTTTGGTTGACCTTGATTTTGGTAGTGTATCAAGATTAAGTTCTTTGAGAGTTCTACGCCTTTCTGGTTGTACAAAACTTGAAAAGACGCCTGCTTTTACCGGCGCATCAAATCTTGAGTACCTTGATATGGATGAATGTACACGTTTATCCGAAGTTCATGAATCCATTGGGGATTTGGCAAAGCTTAAATTTTTGAGTTTGAGAAACTGCACAAATCTGATTGAAATGCCCGATAGGATTAAGTGGATGTCATCCCTTGTAACTCTAGATTTTTGCGGTTGCTCGAGTCTAACAATTCTACCCCTGAAATGGATTTATACCTATGGAATGAGATCTTTGACTTTTTTAGATTTAAGTTTTTGCAATCTTCATGAGCTGCCCAATAATATTGGAACGTTAAAGACATTAGAAAGAGTAAATCTACAAGGAAACAAATTTCGTTCACTACCTGATAGTTTCTATGATCTTCATCGCCTAGCATATCTAAACTTATCTCATTGCCACGAGCTTCAAAATAATATTAGATACCTACACTCAACAAGTTCCCCAGGAAGATATCTTATAATAACAGCGGGATCTCGTAATCCTAGGTCAGGATTATATATATTTGACTGCCCCAAGATCACGAGTTTTCCCAAAAACCAAATCATGAAATCGATATATTTACGAATTCTGCGTAAGAATCCCCTGGGTAGCTATGACGTCGTTATTCCTTGGGATTGGAAAAAAATTGATTTTTCGCCTAGTTGTATTCCAGGATGGTTCAGTCACCAATTTGATGGTGGTTCAATAGTAAGGATAGTAGATTTTAATGAGTTTGACGCGAAGTTTGGCTTTGCCTTCTGTGTGGCATTTGAGGTAAACAATCGTCCTGCAAATTCTGGTTCTCCACCGGATTCATTTTCCTCAGCACTCCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACAGAGGAACGTTTCGATATGCCGCTCAGTTTGGATTTGAACAAAATTGATGGCTCCAAACATCTTTGGCTAATCTATATCTCTCAAGAGCACTGCCATTTTGTAAAAACTGGAGCACATATCACATTTAAAGCCTGTCAAGGTTTGTTCATAAAGAAATGGGGATTGCGCGGGCTATTGAAGAATCAAGTGAGAGATTTTCCCTCCTACTCATACTTATCGGTCACTGTTGAACCCCAACTTTTCTTATATCATGTACAAGAAACCAGCATTAAGTCTGGTCCTAAAATCCAGCTTCCTTACAATTGGTTGGTTACTGAAGAGGAAGAAGTTGAGATTTCTCGAGCCAAGTCAAAAGAAACTGATCTTTCTAATCTGGGCCTTTAG 2331 0.3844 MLNRLHSSLKVLLVLDNVDQLEQLQELEVLKYAQNLPLAIEVVGSFLCTRDATQWRDALDRLKNNPDRKIMDVLQISFDGLQHEEKEIFLHIACFFKGEREDYVRRILDACGLYPHIGIQRVIEKSLITIENQEIHMHDMLQELGKKIVRDRFLDDPGLWSRVWRCNDFYHVLKTKTGTNNNVKAIVLDQKENFPECVAEGFSNLRNLALLILYHNNFSGNLDFLSNNLRYLLWHGYAFTSLPSNFEPHYLVELNMPDSSIQRLWDGRKELPNLKRMDLSNSKYLIETPKFFWTSKLERLDFTGCTNLIQVHPSIGHLTELVFLSLQNCSSLVDLDFGSVSRLSSLRVLRLSGCTKLEKTPAFTGASNLEYLDMDECTRLSEVHESIGDLAKLKFLSLRNCTNLIEMPDRIKWMSSLVTLDFCGCSSLTILPLKWIYTYGMRSLTFLDLSFCNLHELPNNIGTLKTLERVNLQGNKFRSLPDSFYDLHRLAYLNLSHCHELQNNIRYLHSTSSPGRYLIITAGSRNPRSGLYIFDCPKITSFPKNQIMKSIYLRILRKNPLGSYDVVIPWDWKKIDFSPSCIPGWFSHQFDGGSIVRIVDFNEFDAKFGFAFCVAFEVNNRPANSGSPPDSFSSALPHPFYLSFESEHTEERFDMPLSLDLNKIDGSKHLWLIYISQEHCHFVKTGAHITFKACQGLFIKKWGLRGLLKNQVRDFPSYSYLSVTVEPQLFLYHVQETSIKSGPKIQLPYNWLVTEEEEVEISRAKSKETDLSNLGL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02585 776 Gene3D Ribonuclease Inhibitor 171 361 IPR032675 -
Vifa1g02585 776 Gene3D Ribonuclease Inhibitor 437 557 IPR032675 -
Vifa1g02585 776 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 344 432 IPR044974 GO:0006952
Vifa1g02585 776 Pfam Leucine Rich Repeat 250 267 IPR011713 -
Vifa1g02585 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 92 IPR027417 -
Vifa1g02585 776 Gene3D Ribonuclease Inhibitor 362 436 IPR032675 -
Vifa1g02585 776 Gene3D - 7 82 IPR042197 -
Vifa1g02585 776 Pfam Leucine rich repeat 442 499 IPR001611 GO:0005515
Vifa1g02585 776 SUPERFAMILY L domain-like 137 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02585 Vifa-Chr1 406208792 406220124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02585 27 455 WRKY Transcription Factor Family AT5G45050 31.743 4.00e-59 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02585 - - vra:106778604 807.364