Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02527 ATGGTGGCTTGTAAACCTAGAAATAATGTACCAGCAGTAATTGTGTTTGGTGATTCTTCTGTGGATTCTGGAAACAACAATAAGATAGCAACACTTCTGAAGAGCAACTTTAAACCTTATGGCCGCGACTTCGAAGGCGGCCGCCCCACCGGTCGGTTTTGTAACGGTCGCGTTCCACCTGATTTCATCGCCGAGGCTTTTGGTGTTAAGAAGAATATACCAGCATATTTGGATCCTGCTTATACCATTGATGATTTTGTTACTGGTGTTTGCTTTGCTTCTGCTGGAACTGGATATGATAATGCAACTTCTGATGTACTTAATGTGATACCACTATGGAAGGAAATAGAGTTCTACAAAGAGTATCAAGCAAAACTAAGAGCCCATGTTGGTGAAGAGAAGGCAAATGAAATCATAAGTGAAGCATTATACCTAATAAGTTTAGGAACCAATGATTTTCTCGAAAATTACTATATTTTCCCAACAAGACAACTTCATTTTACAGTATCACAATACCAAGATTTTCTAGTGGATATTGCTGATAATTTTGTGAGAAAATTGCACTCACTTGGTGCTAGGAAACTATCCATAACTGGTCTTGTTCCTATAGGGTGTCTTCCATTAGAGAGAGCTACAAATATTTTTGGTGATCATGGTTGCAATAAGAATTATAATAAAGTGGCTTTACAATTTAATGCAAAGTTAGAGAAAATGATTTCTAAGGTGAATAAGGAGCTTCCTCAATTGAAGGCTTTGTCGGCAAATGCTTATGATATTGTCTTTGATATCATTTCTAGACCTTCTTTCTATGGATTTGAGGTGACAGAGAAGGCATGTTGTTCTACTGGAACATTTGAGATGAGCTACTTATGCAGTGACAAGAATCCACTTACATGCAAAGATGCAAGCAAATATGTGTTTTGGGATGCCTTTCATCCCTCTGAGAAGACAAACCGTATAGCTGCAAATTATTTGATCCCTAAACTTTTAGCAGCTTTTAGATAA 1005 0.3751 MVACKPRNNVPAVIVFGDSSVDSGNNNKIATLLKSNFKPYGRDFEGGRPTGRFCNGRVPPDFIAEAFGVKKNIPAYLDPAYTIDDFVTGVCFASAGTGYDNATSDVLNVIPLWKEIEFYKEYQAKLRAHVGEEKANEIISEALYLISLGTNDFLENYYIFPTRQLHFTVSQYQDFLVDIADNFVRKLHSLGARKLSITGLVPIGCLPLERATNIFGDHGCNKNYNKVALQFNAKLEKMISKVNKELPQLKALSANAYDIVFDIISRPSFYGFEVTEKACCSTGTFEMSYLCSDKNPLTCKDASKYVFWDAFHPSEKTNRIAANYLIPKLLAAFR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02527 334 FunFam GDSL esterase/lipase APG 2 329 - -
Vifa1g02527 334 SUPERFAMILY SGNH hydrolase 13 329 - -
Vifa1g02527 334 PANTHER GDSL ESTERASE/LIPASE EXL3 10 325 - -
Vifa1g02527 334 Coils Coil 232 252 - -
Vifa1g02527 334 CDD SGNH_plant_lipase_like 11 328 IPR035669 -
Vifa1g02527 334 Gene3D SGNH hydrolase 2 331 IPR036514 -
Vifa1g02527 334 Pfam GDSL-like Lipase/Acylhydrolase 13 325 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02527 Vifa-Chr1 399534207 399544457 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02527 11 326 Pollen Coat Proteome AT1G75910 37.383 3.87e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02527 - - gmx:100805486 587.8