Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02501 ATGGAAAACTCAGATGATTCATTTGAGGTTGATTCCAATGAAGTTCATTCCACTGATTGTGATACATCTGATGTTCAATTGAATGATGATGAGGGTGACAGTTATCAAAGCTCGGATGATGATGTTGATGGTGCTGATAATGACGATGAAGATGATTCGGTTGAATTAGATGCAATTGTAGGCGATAAAGTGGTAAGTGTTAATTCCATGACTTCTGATGAAATTTGTGCTATGGAATTCAGTTATGTTAATGATGTTTATGATTTTTATTATAAGTATGGTAAATGCAAAGGTTTTTCCATTAGGAAAAGTGATATTAGGAGAAGAGGGCATGAAGGTAGTAAAATAACAGTAATGAGACAATTTGTATGCAACAAGCATGGTTTAAGAGAGAATAAATACTTATGTAGCTTAGATAGGAAAAGCGATCACAAACGTTTGACCTGTACTAAATGCGCAGCTAGGCATCGTGTGCACTATAAAGCCAAAAAGGGTATATATGTAGTGTCAATTTTTGAAGAGGCTCATAACCATGAATTAACCCCATCTAGGTTTGTGCACTTACACCCTGTTTATCATCAAATTTATGAAGCAGATAGAGCTCAGATTAATGTTCTTTAG 621 0.3494 MENSDDSFEVDSNEVHSTDCDTSDVQLNDDEGDSYQSSDDDVDGADNDDEDDSVELDAIVGDKVVSVNSMTSDEICAMEFSYVNDVYDFYYKYGKCKGFSIRKSDIRRRGHEGSKITVMRQFVCNKHGLRENKYLCSLDRKSDHKRLTCTKCAARHRVHYKAKKGIYVVSIFEEAHNHELTPSRFVHLHPVYHQIYEADRAQINVL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02501 206 MobiDBLite consensus disorder prediction 1 53 - -
Vifa1g02501 206 Pfam FAR1 DNA-binding domain 88 181 IPR004330 -
Vifa1g02501 206 MobiDBLite consensus disorder prediction 24 53 - -
Vifa1g02501 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02501 Vifa-Chr1 398094790 398095410 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa1g02501 FAR1 5.6e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02501 - - tpra:123915240 217.624