LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g02484	ATGGCTTTAACTTTAACTTCGACGCACCTTCGTTTTCAACCTTTACTCTCGCGCACCAACTACGTCTTCTTCTCCGACCTTACCGAATTCCGTTCTCTCGAAACACAGAGTCGTGATTCTCTCACTCCTCTTCTCCGGAGAAAGATCTCCGTTACGTCACTGTCGGCTCTGAAGCCGGTGAAATGCAGTAGATCCACGGAGGAGAAGCAGTGGAACGAGACGGAATCCGTCGCGTCTGACGCCGATGAAGCTGTAGATGAGTCAAATGGTCCGAATCCGATCCGAACTTCTTCTATTGAGCCTCAGAGGATTGCAGGCGATTCTCCTTCTCTCGGAATTCGAGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGACGGGGCAGTATCGACTAGAAAAATCAACAGGAGACAATTATTGAAGTCGAGTGGTCTTCGTCCCCGGGATGTCCGGAGTGTGGATCCATCATTGTTTTTGACGAATTCAATGCCTTCTTTGCTGGTTCGTGAGTATGCTATACTTCTAAACCTGGGTTCGCTACGAGCAATAGCAATGCAAGATTGTGTGCTTATATTTGACTATAATCGTAAAGGTGGGCAAGCTTTTCTAGACACTTTGCTGCCTAGGTTGAACCCCAAGAATAACAATGGAGGGCCATCAATGCCATTTGAAATTGAGGTTGTCGAAGCAGCATTGCTTTCAAGAATACAACGTTTGGAGCGGAGACTGATGGACTTAGAACCCCGTGTTCAAGCTCTTCTTGAGGCGTTGCCAAATCGGATAACTGGTGACATATTGGAGCAACTACGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCGAGGGCAGGAGCTCTCCGGCAGATGCTTCTTGACCTTCTGGAGGACCCAAATGAAATACGGCGGATGTGTATTATGGGAAGAAACTGTACACTTAATAAAGGAAACAATAATGTGGAATGCTCAGTGCCCTTAGAAAAGCAGGTTGCTGATGAGGAGGAGGAGGAAATTGAAATGCTTCTGGAAAATTATCTCCAAAGATGTGAATCTTGTCATGGTCAATCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAGGATTCTATAGCTGTCAGTTTGAGCTCACGAAGACTTGAAGTTAGTAGAGTGGAATTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACAAGTGTTTGCATTTTGGCTAACTACATCTGGGATCATTATTGGCGGCGTTATTATTTTTTTTCTTATGTATAACTACCTCAGAGCAAGAAAAATATTTTGA	1344	0.4457	MALTLTSTHLRFQPLLSRTNYVFFSDLTEFRSLETQSRDSLTPLLRRKISVTSLSALKPVKCSRSTEEKQWNETESVASDADEAVDESNGPNPIRTSSIEPQRIAGDSPSLGIREPVYEVVEVKSDGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDYNRKGGQAFLDTLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPNEIRRMCIMGRNCTLNKGNNNVECSVPLEKQVADEEEEEIEMLLENYLQRCESCHGQSERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEQVFAFWLTTSGIIIGGVIIFFLMYNYLRARKIF	447

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g02484	447	FunFam	Magnesium transporter MRS2-11, chloroplastic	196	378	-	-
	Vifa1g02484	447	Gene3D	-	113	194	-	-
	Vifa1g02484	447	MobiDBLite	consensus disorder prediction	64	107	-	-
	Vifa1g02484	447	Coils	Coil	236	256	-	-
	Vifa1g02484	447	CDD	Mrs2_Mfm1p-like	120	446	IPR039204	-
	Vifa1g02484	447	PANTHER	RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL	81	446	IPR039204	-
	Vifa1g02484	447	Coils	Coil	327	347	-	-
	Vifa1g02484	447	FunFam	Magnesium transporter MRS2-11, chloroplastic	113	194	-	-
	Vifa1g02484	447	Gene3D	Magnesium transport protein CorA, transmembrane region	195	378	-	-
	Vifa1g02484	447	MobiDBLite	consensus disorder prediction	90	104	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g02484	111	447	MRS2 Gene Family	AT5G22830	82.789	0.0	555

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g02484	K16075		-	gmx:100808371	659.833

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa1g02484	1	395478448	395489410	Vifa1g02484	1	395478448	395489410	ECH

Showing 1 to 1 of 1 entries