Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02455 ATGACCGCTTTCTTTCTCACCCTTACCTCTCTTTTTTTCCTTATCATCACATTAAAGCTCTTGTTACACACAACAAGGTTCAAGAACCTTCCACCAGGCCCACCATTTCTTCTAATAATTGGAAACCTTCATCAACTCAAACAACCCCTCCACCATACTTTCCAAACCTTATCACAAAAACATGGCCAAATATTTTCTCTTTGGGACGAGATTATGAGACTTATACAAAAGCTAGCAAGAGTGTCATACCATGATTTTTCAGAGGTGGAACTTACGCCAATGTTTTCAGAATTGACATTCAACACGGTCATGAGAATGATGTCAGGGAAACAATACTTTGGTGATGATTATGATGTGAGTGATGTTAAGGAAGCAAGGTTGTTTAGAGAGATAATGAAAGAGATTACGAGTATAGGAGGAGCAACCAACGTTAGTGATTTTTTAGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGTCTTAAAAGGATAAGTAAGAGAGTATATTCATTTTTACAAAGACTCATTGATGAACATAGATTTGGAAAGAGGAACACTAATACTATGTTAGATTATCTCTTAAAACAGCAGCAGTCACAACCTGAATATTACACAGATCAAATCATCAAAGGACTTATTATGGTTATGCTTATTGTAGGAACTGACACATCATCTATAACTTTAGAATGGGCTATGGCCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGTTCGACACCCACATGGGACAAGACTACTTCATAGATGAACATGATATTTCAAAACTTTCTTATCTTCAAAATATTGTTTATGAGACTCTTCGATTACATCCAGCTGCTCCACTATTATTGCCTCATTTTTCTTCAGAAGATTTTACAATTGAAAAATATAATATCCCACAAAACACAATTTTAATGGTCAATGCATGGGCCATTCATAGAGATCCAAATTTGTGGACTGATCCTATATGTTTTAAGCCTGAGAGATTTGAGAAAGAAGGTGAGATAAATAAACTACTTTCATTTGGAATGGGTAGAAGGGCTTGTCCAGGAGAAAATTTGGCTCATCGCACAGTAAAGAAAAAATTAACATGGGCGGAAAAAAAAGGAATTACTATGGGAAAAGAGATTTCCTTAAAAGCAATGTGCAAATTGCGTCATCCAATGATGATTAAAAATTCTTTCTAA 1206 0.3474 MTAFFLTLTSLFFLIITLKLLLHTTRFKNLPPGPPFLLIIGNLHQLKQPLHHTFQTLSQKHGQIFSLWDEIMRLIQKLARVSYHDFSEVELTPMFSELTFNTVMRMMSGKQYFGDDYDVSDVKEARLFREIMKEITSIGGATNVSDFLGFLRWFDFDGLEKSLKRISKRVYSFLQRLIDEHRFGKRNTNTMLDYLLKQQQSQPEYYTDQIIKGLIMVMLIVGTDTSSITLEWAMANLLNNPNILKKAKDEFDTHMGQDYFIDEHDISKLSYLQNIVYETLRLHPAAPLLLPHFSSEDFTIEKYNIPQNTILMVNAWAIHRDPNLWTDPICFKPERFEKEGEINKLLSFGMGRRACPGENLAHRTVKKKLTWAEKKGITMGKEISLKAMCKLRHPMMIKNSF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02455 401 PRINTS E-class P450 group IV signature 269 285 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PRINTS E-class P450 group IV signature 212 238 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PRINTS E-class P450 group IV signature 303 317 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PRINTS E-class P450 group IV signature 319 337 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PANTHER CYTOCHROME P450 82C3-RELATED 70 367 - -
Vifa1g02455 401 Gene3D Cytochrome P450 69 386 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 Gene3D Cytochrome P450 21 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 Pfam Cytochrome P450 85 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 SUPERFAMILY Cytochrome P450 24 371 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 348 357 IPR017972 GO:0005506|GO:0016705
Vifa1g02455 401 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PRINTS P450 superfamily signature 221 238 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PRINTS P450 superfamily signature 274 285 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02455 401 PRINTS P450 superfamily signature 346 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02455 Vifa-Chr1 393308542 393310237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02455 4 63 Cytochrome P450 AT4G37330 47.541 6.21e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02455 K13260 - gmx:100811727 461.07