Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02454 ATGACCGTTTTCTTTCTCACCCTTACCTCTTTTTTTTTTCCTTATCATCACATTAAAGCTCTTGTTACACACAACAAGGTTCAAGAACCTTCCACCAGGCCCACCATTTCTTCCAATAATTGGAAACCTTCATCAACTCAAACAACCCCTCCACCATACTTTCCAAACCTTATCACAAAAACATGGCCAAATATTTTCTCTTTGGTTAGGGACGAGATTATGAGACTTATACAAAAGCTAGCAAGAGTGTCATACCATGATTTTTCAGAGGTGGAACTTACGCCAATGTTTTCAGAATTGACATTCAACACGGTCATGAGAATGATGACAGGGAAACGATACTTTGCTGATGATTGTGATGTGAGTGATGTTGAGGAAGCAAGGTTGTTTAGAGAGATAATGAAAGAGATTACGAGTATAGGAGGAGCAACCAACGTTAGTGATTTTTTAGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGTCTTAAAAGGATAAGTAAGAGAGTAGATTCATTTTTACAAAGACTCATTGATGAACATAGATTTGGAAAGAGGAACACTAATACTATGTTAGATCATCTCTTAAAACAGCAGCAGTCACAACCTGAATATTACACAGATCAAATCATCAAAGGACTTATTATGGTTATGCTTATTGCAGGAACTGACACATCAGCTATAACTTTAGAATGGGCTATGGCCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGTTCGACACCCACATGGGACAAGACTACTTCATAGATGAACATGATATTTCAAAACTTTCTTATCTTCAAAATATTGTTTATGAGACTCTTCGATTACATCCAGCTGCTCCACTATTATTGCCTCATTTTTCTTCAGAAGATTTTACAATTGAAAAATATAATATCCCACAAAACACAATTTTAATGGTCAATGCATGGGCCATTCATAGAGATCCAAATTTATGGACTGATCCTATATGTTTTAAGCCTGAGAGATTTGAGAAAGAAGGTGAGATAAATAAACTAATTTCATTTGGAATGGGAAGAAGGGCTTGTCTAGGAGAAAATTTGGCTCATCGCACAGTGAGTTTGACTTTAGGCTTATTGATTCAGTGTTTTGAGTGGAAACGTATAGGTAAAGAAAAAATTGACATGGGCGAAAAAAAAGGAATTACTATGGGAAAAGAGATTTCCTTAAAAGCAATGTGCAAATTGCATCATCCAATGATGATTAAAAATGCTTTCTAA 1263 0.3508 MTVFFLTLTSFFFPYHHIKALVTHNKVQEPSTRPTISSNNWKPSSTQTTPPPYFPNLITKTWPNIFSLVRDEIMRLIQKLARVSYHDFSEVELTPMFSELTFNTVMRMMTGKRYFADDCDVSDVEEARLFREIMKEITSIGGATNVSDFLGFLRWFDFDGLEKSLKRISKRVDSFLQRLIDEHRFGKRNTNTMLDHLLKQQQSQPEYYTDQIIKGLIMVMLIAGTDTSAITLEWAMANLLNNPNILKKAKDEFDTHMGQDYFIDEHDISKLSYLQNIVYETLRLHPAAPLLLPHFSSEDFTIEKYNIPQNTILMVNAWAIHRDPNLWTDPICFKPERFEKEGEINKLISFGMGRRACLGENLAHRTVSLTLGLLIQCFEWKRIGKEKIDMGEKKGITMGKEISLKAMCKLHHPMMIKNAF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02454 420 PANTHER CYTOCHROME P450 82C3-RELATED 71 409 - -
Vifa1g02454 420 MobiDBLite consensus disorder prediction 29 48 - -
Vifa1g02454 420 CDD CYP81 64 404 - -
Vifa1g02454 420 PRINTS E-class P450 group I signature 347 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS E-class P450 group I signature 212 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS E-class P450 group I signature 357 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS E-class P450 group I signature 316 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS E-class P450 group I signature 232 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS E-class P450 group I signature 275 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS E-class P450 group I signature 100 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 Pfam Cytochrome P450 62 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 350 359 IPR017972 GO:0005506|GO:0016705
Vifa1g02454 420 SUPERFAMILY Cytochrome P450 61 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 Gene3D Cytochrome P450 26 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS P450 superfamily signature 223 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02454 420 PRINTS P450 superfamily signature 348 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02454 Vifa-Chr1 393267529 393269225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02454 64 409 Cytochrome P450 AT4G37330 55.043 4.09e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02454 K13260 - gmx:100811727 511.916