Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02453 ATGTTTTCAGAATTGACATTCAACACAGTCATGAGAATGATGACAGGGAAACGATACTTTGGTGATGATTGTGATGTGAGTGATGTTGAGGAAGCAAGGTTGTTTAGAGAGATAATGAAAGAGATTACGAGTATAGGAGGAGCAACCAACGTTAGTGATTTTTTAGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGACTTAAAAGGATAAGTAAGAGAGTAGATTCATTTTTACAAAGACTCATTGATGAACATAGATTTGGAAATAGGAACACTAATACTATGTTAGATCATCTCTTAAAACAGCAGCAATCACAACCTGAATATTACACAGATCAAATCATCAAAGGACTTATTATGGTTATGCTTATTGCAGGAACTGATACATCAGCTATAACTTTAGAATGGGCTATGGCCAATTTATTAAATAATCCAAATATATTAAAGAAGGCAAAAGATGAGTTCGACACCCACATGGGACAAGACTACTTCATAGATGAACATGATATTTCAAAACTTTCTTATCTTCAAAATATTGTTTATGAGACTCTTCGATTACATCTAGCTGCTCCACTATTATTGCCTCATTTTTCTTCAGAAGATTTTACAATTGAAAAATATAATATCCCACAAAACACAATTTTAATGGTCAATGCATGGGCCATTCATAGAGATCCAAATTTGTGGACTGATCCTATATGTTTTAAGCCTGAGAGATTTGAGAAAGAAGGTGAGATAAATAAACTAATTTCATTTGGAATGGGAAGAAGGGCTTGTCCAGGAGAAAATTTGGCTCATCGCACAGTGAGTTTGACTTTAGGCTTATTGATTCAGTGTTTTGAGTGGAAACGTATAGGTAAAGAAAAAATTGACATGGGCGAAAAAAAAGGAATTACTATGGGAAAAGAGATTTCCTTAAAAGCAATGTGCAAATTGCGTCATCCAATGATGATTAAAAATGCTTTCTAA 978 0.3374 MFSELTFNTVMRMMTGKRYFGDDCDVSDVEEARLFREIMKEITSIGGATNVSDFLGFLRWFDFDGLEKRLKRISKRVDSFLQRLIDEHRFGNRNTNTMLDHLLKQQQSQPEYYTDQIIKGLIMVMLIAGTDTSAITLEWAMANLLNNPNILKKAKDEFDTHMGQDYFIDEHDISKLSYLQNIVYETLRLHLAAPLLLPHFSSEDFTIEKYNIPQNTILMVNAWAIHRDPNLWTDPICFKPERFEKEGEINKLISFGMGRRACPGENLAHRTVSLTLGLLIQCFEWKRIGKEKIDMGEKKGITMGKEISLKAMCKLRHPMMIKNAF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02453 325 PRINTS P450 superfamily signature 253 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS P450 superfamily signature 128 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS P450 superfamily signature 181 192 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS P450 superfamily signature 262 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 Gene3D Cytochrome P450 1 317 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 221 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 137 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 262 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 117 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 252 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 255 264 IPR017972 GO:0005506|GO:0016705
Vifa1g02453 325 Pfam Cytochrome P450 8 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02453 325 PANTHER CYTOCHROME P450 82C3-RELATED 2 318 - -
Vifa1g02453 325 SUPERFAMILY Cytochrome P450 2 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02453 Vifa-Chr1 393254003 393255182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02453 1 322 Cytochrome P450 AT4G37370 55.280 2.16e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02453 K13260 - gmx:100811727 481.87