Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02311 ATGTCAAATTCAATTTCCGAATTTGCCACCACTCTTCTCCCACGGAGCACCGAAAACCCTCAACAGGACCCGATTCCACAAAATGGATCAATCTCCGGGGCAGTGTTCAACATCTCCACCACCATGGTCGGTGCCGGAATCATGGCGATTCCGGCGACCATGAAAGTCCTCGGCATAATTCCGGGGCTAATTGTGATCGTGTTTGTGGCGGTTATAACGGATTTAACGGTTGAGTTTATGTTGAGGTGTACGACTTCTGGTAAAGCGGTTACGTATGCGGGGATGGTGGGTGAGTCGTTTGGTTGGCGTGGATCTCTTGCTGTTAAGCTTTGTGTTATTACCACTAATCTTGGTGTTCTTATCGTTTTTTTCATTATTCTTGGAGATGTTCTTTGTGGAAATGAGTACGAAGGTACCATACATTTAGGTATTCTACAACAATGGTTTGGCATCCACTGGTGGACGTGTCGCACTTTTGCTCTGCTGGTTGTCGCACTTGTCATAATGCTCCCCCTAGTTATGTTACGCCGTGTAGATTCACTCAAGTATAGTTCTGCATTATCGATCCTTTTAGCGTTGGTTTTTGTTGTAATATGCTCATCGATGGCAGTTACTGCATTATCGTCCGGCTTCGGATTCCATGTCAATGTTCATCCCATTAGAGCAGAGCTTGTAAAACCGTCAGACATGAGTTCGGCCGTGCGAATTTCATTGTTAATCTCTGTTTCCATTTACTTTGCTATTGGATTCTTCGGATACCTATTGTTTGGCGACTCCATAATGCCGGACGTGTTGGTAAACTTCGACCAGAACTCCGATTCAAGTTTCGGTCGATTGCTAGACAACATTATTCGGATAAGCTACGCTCTCCATCTTGCACTTGTATTCCCCATGTTGAACTATTCTTTGAGGGCCAATATAGATGAACTACTATTCTCAAATAAAAATAAGCCTCCTTTGGCTTTGGACACTCCAAGATTTGTGCGAATCACTCTTGTTTTGTTAGCATTCACATATTTGGTGGCTGTGGCTATTCCAAATGTTTGGTACTTTTTTCAGTTCTTGGGATCTACTACCATTGTTTGCCTCTCGTTCATCTTCCCTGCTGCAATCATACTAAGGGATATGCATGGTATATCAAAAACAAGAGATAAAGTAATGGCAATAGTGGTGATAATTTTGGCTGTTGCGACAAGTGGAATTGCTATATGGACCAATTTGAATGTTATTAGTTAA 1236 0.4272 MSNSISEFATTLLPRSTENPQQDPIPQNGSISGAVFNISTTMVGAGIMAIPATMKVLGIIPGLIVIVFVAVITDLTVEFMLRCTTSGKAVTYAGMVGESFGWRGSLAVKLCVITTNLGVLIVFFIILGDVLCGNEYEGTIHLGILQQWFGIHWWTCRTFALLVVALVIMLPLVMLRRVDSLKYSSALSILLALVFVVICSSMAVTALSSGFGFHVNVHPIRAELVKPSDMSSAVRISLLISVSIYFAIGFFGYLLFGDSIMPDVLVNFDQNSDSSFGRLLDNIIRISYALHLALVFPMLNYSLRANIDELLFSNKNKPPLALDTPRFVRITLVLLAFTYLVAVAIPNVWYFFQFLGSTTIVCLSFIFPAAIILRDMHGISKTRDKVMAIVVIILAVATSGIAIWTNLNVIS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02311 411 PANTHER AMINO ACID TRANSPORTER 25 398 - -
Vifa1g02311 411 Pfam Transmembrane amino acid transporter protein 203 401 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02311 Vifa-Chr1 371446019 371451279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02311 7 407 Amino Acid or Auxin Permease AAAP Family AT3G56200 48.724 7.75e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02311 - - gmx:100794031 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02311 1 371446019 371451279 Vifa2g01744 2 450593778 450595660 PCT