Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02289 ATGAATTTTGAATCAGAACCCTATAAATTTGTGTGCCAAAATCCTCGCAATTATGAAAATTATGATATCTGGCACTCTGCCAACCCACTTCATAACCCACGTTCTCTTTTCTTACTTCAATATTCTTTGCTTTCCGTTGTTTCTCAATTTATCTATCTTTGTATCCAACCTCTTGGTCAATCATCAATTGTAGCTCAGATTCTTGGTGGAGTATTACTTGGGCCAACATTTCTTGGTCACAAAAAGATAATGATATCAAATGCATTGTTTCCTCCAAAAGGGTCAATGGTAATTGAAACAACAGCAGCATTTGGAGCGATGTTCTTCTTCTTCATAGTAGGTGTAAGGATGGATCCTGGTACATTATGGAAGACTGAAAAAAAGGCCATCATGATAAGTGCTTTTGTATTCCTGTTCACATTACTAATTCCAAGTAGTTTAGCCTTCTTGATGATTCGTTATGTTCCCATGGACAAAAGCCTTTCCATATCTCTTCCATTTATAGCTCTTTCCCACACCTTTACTGCTTTTGCGGTCGTAACAATCGTTCTCACGGAGCTGAAGATTCTAAACACGGACATTGGCCGATTAGCCATGTCGGTCGCAATGTTTTCTGACATTGTTGGATTTTCATTGGCAATAATTCTCTTTTCAGTACTTCAAAACAAAAGTGGTGGTTTTACTAACTTCATATCTATCTTTTCATCTTTAGCTGCACTCGTTCTTTCGATTATCTTTGTAATGAAACCGTTACTTATAGGGATCTCTAAGAAACTAAAAAGCGAAAAGCATGTGAGTGAATGGTTCTTTGTTTGTATCATGGTCTTTGTTCTTATAACTGGTCTTCTTAGTGAAGCTATTGGACAACATTATGTTATGGGACCATTGCTTTTAGGATTGGTTTTACCAGAAGGGCCACCTATAGGAACAAGTTTGATTGCTAAAATAGAGGCATTTACTTATGCATTCTTTTATCCGATTTACCTTACGATTTCCGGAATGAAAACTAATCTCTTCAAGATTGATTACAAGTCTATGTGGATTATGTGTCTCCTTGTGGTTGTTTCTGTTGTGGTGAAAACTGGAGCTGTTATGCTTTCTGGATACTACACTAATGTACCTTTGAAAGAATGTTTCGTGATCGGGCTGATTGTGAACTCACGGGGCGTAGCGGAACTTCTTGTTTATAATCTATGGAGGGGATCCAAGTTACTATCCGAACAAGAGTTCTCTTTGGCAGTGTTTTCTGTCATCGCGATAAATGCTATCGTTACGCCGCTTATAAAAATTTTGACAGAAAACATCCCAGCAATGATGAACCTATTGGAAGTATCTCATGCAAGTGAAGATAGCAATGTTAGAGTGACAGCACTAATTCTAGTAGAGCTTTTAGGAAGATCAAGACCACTTCTTGTCGCGCATCAACCGCACGATATCCTAAGGTGCACCTCGTCAAATTCAAAACAAGTCAATCATGCATTTTACCAATATATAGAACAGAATAAAGGGTATGCAACAGTTGAATTGTTTACTTCGGTCTCGAATTTAGAAACCATGAATGATGATGTTTGTCGGATAGCAATCGACAGAATTGCCAACATTTTGATTCTTCCTTTTCATAAGCAATGGGAGATTGATGGAAGTGTTGAAGTAACAAACAAATCAATTCAATACATGAACATTAAAGTTCTAAACACGGCGCCATGTTCTGTCGGAATCCTAGTTGATAGAAGTGCAAACAATACCAAACCACTGTTTTCAAAGTCTACAACTCCGTCATCGTACCAGGTCGGCGTGTTCTTCATTGGAGGTCCAGATGATATAGAAGCACTAGCCTATAGTTCAAGAATGTGCAGGCATGAGAGCGTGAAAGTTACCGTGATTCGGTTTCTAGAATATGGATTGGAAAATTCTAAAGAAAGGAGGCGCGAGGGCGATATGATTGGCGAATATCGAAACATAAATAAGGCAAACCGTAGGTTTAAGACGATTGATGAAGTTATAAAAGACGGAATAGAAATGTCCAAGAGAATTAAAAAACGGATAGATTCTTTTGATTTGGTTATGGTAGGAAAGGAGCATGCAAAATCAGCTTTGCTTCAAGGGTATGAGGAATGGAGTGAGTGTCCTGAATTAGGAGTCATTGGAGACATGCTTTCTTCTCCGGATTTCGAAACCAAGACTTCTATTTTGGTTGTGCAACAACAGAGAATTATTCAAAGAAAGTTTTCTAAGGCCAAAGTTTTTCCAATGACACATGAAAAAGAAAAAGATTACCTTTTAGATTCTCATGCATTTGATATGCAAATAAGAATAGATGAAAAAAAAGTAGAAGATAGATAA 2343 0.3756 MNFESEPYKFVCQNPRNYENYDIWHSANPLHNPRSLFLLQYSLLSVVSQFIYLCIQPLGQSSIVAQILGGVLLGPTFLGHKKIMISNALFPPKGSMVIETTAAFGAMFFFFIVGVRMDPGTLWKTEKKAIMISAFVFLFTLLIPSSLAFLMIRYVPMDKSLSISLPFIALSHTFTAFAVVTIVLTELKILNTDIGRLAMSVAMFSDIVGFSLAIILFSVLQNKSGGFTNFISIFSSLAALVLSIIFVMKPLLIGISKKLKSEKHVSEWFFVCIMVFVLITGLLSEAIGQHYVMGPLLLGLVLPEGPPIGTSLIAKIEAFTYAFFYPIYLTISGMKTNLFKIDYKSMWIMCLLVVVSVVVKTGAVMLSGYYTNVPLKECFVIGLIVNSRGVAELLVYNLWRGSKLLSEQEFSLAVFSVIAINAIVTPLIKILTENIPAMMNLLEVSHASEDSNVRVTALILVELLGRSRPLLVAHQPHDILRCTSSNSKQVNHAFYQYIEQNKGYATVELFTSVSNLETMNDDVCRIAIDRIANILILPFHKQWEIDGSVEVTNKSIQYMNIKVLNTAPCSVGILVDRSANNTKPLFSKSTTPSSYQVGVFFIGGPDDIEALAYSSRMCRHESVKVTVIRFLEYGLENSKERRREGDMIGEYRNINKANRRFKTIDEVIKDGIEMSKRIKKRIDSFDLVMVGKEHAKSALLQGYEEWSECPELGVIGDMLSSPDFETKTSILVVQQQRIIQRKFSKAKVFPMTHEKEKDYLLDSHAFDMQIRIDEKKVEDR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02289 780 Gene3D - 35 437 IPR038770 -
Vifa1g02289 780 PANTHER CATION/H + ANTIPORTER 11 431 - -
Vifa1g02289 780 Pfam Sodium/hydrogen exchanger family 46 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02289 Vifa-Chr1 367759604 367763108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02289 11 735 Antiporter Super Family AT2G13620 32.567 1.01e-136 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02289 K26731 - gmx:100779700 788.875