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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vifa1g02256
ATGGCGAGAGGTTTGAAGAAGCATTTGAAGAGGATCAATGCCCCCAAGCATTGGATGCTTGACAAATTGGGCGGTGCTTTTGCTCCTAAACCCTCATCTGGACCCCACAAGTCGAGGGAGTGTCTTCCACTTATTCTCATCTTGCGTAACAGGTTGAAGTATGCTTTGACATACCGTGAGGTTATCGCCATTCTCATGCAACGCCATGTCCTTGTTGATGGCAAGGTCAGGACTGACAAGACCTATCCAGCTGGATTCATGGATGTTGTATCTATTCCTAAAACCAATGAGAACTTCCGTCTGCTCTATGACACTAAAGGCCGTTTCAGACTTCACTCTGTTAGGGATGATGAGGCGAAGTTCAAGCTTTGCAAGGTTAGATCAGTTCAATTTGGTCAGAAAGGTATTCCATACCTGAACACCTATGATGGTCGCACCATCCGCTACCCAGACCCTGTCATCCGGGCCAACGACACCATCAAGCTGGATCTAGAGGAAAACAAGATTGTCGATTTCATTAAGTTTGATGTTGGCAATGTTGTTATGGTTACTGGTGGAAGAAACAGAGGGCGTGTCGGTGTGATCAAGAGCAGGGAGAAGCATAAGGGAACCTTTGAGACCATCCACGTTCAGGATGCTACTGGTCATGAGTTTGCAACTCGTTTGGGCAATGTGTTTACTATCGGTAAGGGTACTAAGCCATGGGTATCTCTTCCCAAGGGTAAGGGTATTAAGCTAACCGTTATCGAAGAAGCTAGGAAAAGGGCTGCTGCAGCTCAACAAGCAGTTGCTGCTTAA
798
0.4662
MARGLKKHLKRINAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPVIRANDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKSREKHKGTFETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTVIEEARKRAAAAQQAVAA
265
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vifa1g02256
265
Pfam
Ribosomal family S4e
95
169
IPR013845
-
Vifa1g02256
265
PIRSF
RPS4a_RPS4e
1
241
IPR000876
GO:0003735|GO:0005840|GO:0006412
Vifa1g02256
265
FunFam
40S ribosomal protein S4
1
117
-
-
Vifa1g02256
265
Pfam
S4 domain
47
90
IPR002942
GO:0003723
Vifa1g02256
265
CDD
S4
51
112
-
-
Vifa1g02256
265
Gene3D
-
1
117
IPR036986
GO:0003723
Vifa1g02256
265
PANTHER
30S/40S RIBOSOMAL PROTEIN S4
2
254
IPR000876
GO:0003735|GO:0005840|GO:0006412
Vifa1g02256
265
Hamap
30S ribosomal protein S4e [rps4e].
7
238
IPR000876
GO:0003735|GO:0005840|GO:0006412
Vifa1g02256
265
Gene3D
-
122
172
IPR038237
-
Vifa1g02256
265
SMART
s4_6
42
106
IPR002942
GO:0003723
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vifa1g02256
Vifa-Chr1
362258505
362260235
Dispersed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vifa1g02256
1
262
Cytoplasmic Ribosomal Protein Gene Family
AT5G58420
90.458
0.0
507
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vifa1g02256
K02987
-
gmx:100795220
488.034
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Vifa1g02256
1
362258505
362260235
Vifa1g02256
1
362258505
362260235
ECH
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