Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g02202 | ATGTCTTTCAACATCAACAAGAAAAAGTTCTTGAGAACACTCTTTTCATCTAACAAAAGTTGTGGTTGCCTCAAAATAAAACCCTCTAATGTCCTTGAACCCTCTATAAAACCTAAAATCTCAATTTATCAAAATCAAAATAAAAACCCTAGCAGCGCCACTTCTTCCGCCTCCACCACCAACGATGATGATAAAGTTTTGGCTTTCAGTCCCGTCTGTGAAGCCAAAATTTCTCATCATAACAACAATACTATTTTAAAATTAGGTACGAAACTCGTCGATAGTATTGCGGTCGAGAAGGAGTCTGACGATCCGTACGATGATTTCCGAAACTCGATACTTCAAATGATATTGGAAAGAAAGATCTACGCAGAAAAGGATCTTGAAGAGCTTCTTGAATGCTTTCTTCAGCTTAACGCAAAGTGTCACCACCAAGTCATCGTTGAAGCCTTCATGGAGATATGTGAAGAAATATTCCCTAAGAAACTTCAAGGCGAAGGTGAAGAGTCTCAAAGGAATAATCAGATTAATGGAAAGAGTTAG | 543 | 0.3794 | MSFNINKKKFLRTLFSSNKSCGCLKIKPSNVLEPSIKPKISIYQNQNKNPSSATSSASTTNDDDKVLAFSPVCEAKISHHNNNTILKLGTKLVDSIAVEKESDDPYDDFRNSILQMILERKIYAEKDLEELLECFLQLNAKCHHQVIVEAFMEICEEIFPKKLQGEGEESQRNNQINGKS | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g02202 | 180 | Pfam | Transcriptional repressor, ovate | 102 | 159 | IPR006458 | - | |
Vifa1g02202 | 180 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 96 | 157 | IPR006458 | - | |
Vifa1g02202 | 180 | ProSiteProfiles | OVATE domain profile. | 98 | 157 | IPR006458 | - | |
Vifa1g02202 | 180 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 54 | 159 | IPR038933 | GO:0045892 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g02202 | Vifa-Chr1 | 354124081 | 354124623 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Vifa1g02202 | Ovate | 2.8e-23 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g02202 | - | - | psat:127086665 | 306.219 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g02202 | 1 | 354124081 | 354124623 | Vifa1g02202 | 1 | 354124081 | 354124623 | ECH | |
Vifa1g02202 | 1 | 354124081 | 354124623 | Vifa6g00367 | 6 | 151103987 | 151104502 | PCT |