Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02191 ATGGTTTCTAGAATGGATCCGTACGAGATCATGGAACCCATAAGTGGCGGTGCATTTGGTGCTGCCATTCTCGTTAATCACAAGTTGGAGAAGAAAAGATACGTGTTGAAGAAAATTAGGCTTGCGCGGAAAACTGAACGGTGTAGAAAATCTGCTCATCAAGAGATGGATCTTATTGCTCGGATTAAGCACCTTTACATTGTGGAATTCAAGGAGGCTTGGGTTGACAAGGGTTTCTATGTCTGCATTGTTACTGGATATTGTCAAGGTGGAGACATAGCAGCATTGATGAAAAAATCAAATGGAGTTTACTTTTCTGACGAGAATACCTGCATTCAAAATTTGTTTTACACCTGTTTTAACATCTTTCTCACCAAGGATCATGATGTTTGCCTGGGAGACTTTGGACTTGCTAAGACACTAAAAGCGGATGATTTGACTTCTTCGGTATGTGCGAAATTAGGAACTCGGTGTTGTATATATGAGATGGCTGCTCACCGCCCTGCTTTCAAAGCTTTTGATATGGACGGCTTGATAAGCAAGATAAGCTGTCCCTCTATTGGTGCTTTGCCTTCCTGTTATTCCCCATCCTTGTTTTAG 600 0.4167 MVSRMDPYEIMEPISGGAFGAAILVNHKLEKKRYVLKKIRLARKTERCRKSAHQEMDLIARIKHLYIVEFKEAWVDKGFYVCIVTGYCQGGDIAALMKKSNGVYFSDENTCIQNLFYTCFNIFLTKDHDVCLGDFGLAKTLKADDLTSSVCAKLGTRCCIYEMAAHRPAFKAFDMDGLISKISCPSIGALPSCYSPSLF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02191 199 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Vifa1g02191 199 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 121 198 - -
Vifa1g02191 199 SMART serkin_6 8 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa1g02191 199 Pfam Protein kinase domain 8 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa1g02191 199 ProSiteProfiles Protein kinase domain profile. 8 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa1g02191 199 SUPERFAMILY Protein kinase-like (PK-like) 5 197 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02191 Vifa-Chr1 351853267 351856764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02191 5 152 AGC Kinase Gene Family AT3G08730 25.000 4.78e-08 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Vifa1g02191 Pkinase 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02191 K08857 - thj:104799564 287.73