Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g02183 | ATGAACAACTTCACAGGTGAAATTCCATATAAACTCGGTCTCAATGGGAACATTCAAGTCCTTGATTTGTCTTCTAATAAACTCACCGGTGTTATTCCACCTCACCTTTGTTCTTCAAACCAGCTTAAGATTTTGATTCTTCTTAACAATTTTCTGTTTGGTCCTATACCACAAGGTTTAGGAACATGTTATAGTCTCACTAGAGTGAGATTAGGAGAGAATTACCTTAATGGCAGTATTCCAGATGGTTTTCTTTATCTTCCTAAGCTGAATTTAGCTGAGTTGAAGAACAATTACTTGTCAGGAACATTGTTAGAAAATGGTAACGCTTCGTCTTCTCTTTGTTTACAACAGCTTGATTTGTCAAACAATGCTTTGTCTGGTCCTTTACCACATTCCCTCTCCAATTTCACTTCGCTTCAAATCCTTTCGCTTACTGGAAACCAATTCTCGGGTCCCATTCCAAGTTCCATTGGAGGACTTAACCAGGTTTTGAAACTTGACCTTAGCAGAAACTTGTTATCAGGTGAAATTCCGCCCCAAATTGGAAACTGTCTTCATCTTACCTATCTTGACATGAGCCAGAACAATCTCTCTGGCTCCATTCCGCCCTTGTTTTCTAACATTCGTATTTTGAATTACTTGAACTTGTCTAGAAACCATTTGAACCAAACCATACCAAAGTCAATAGGAACAATGAAAAGCCTCACAGTTGCTGATTTCTCCTTCAACGAATTCTCTGGAATCAACTCCACACCAGGAAAAAAAACCAATGCGGATTTCAAGCTCATTTTCGCGCTAGGCCTATTGATGTGCTCGTTAGTCTTTGTTATCACAGCGATTATTAAGGCCAAGTCATTCAAAAAGAATGGTCCTGGTTCTTGGAAGATGACTGCCTTTAAAAAGCTCGAGTTCACTGTTTCGGACATCCTCGAATGCGTGAAAGACGGTAACGTGATCGGAAGAGGAGGTGCAGGGATAGTTTACCATGGAAAAATGCCTAATGGTGTGGAAATAGCAGTAAAAAAGCTACTCGGTTTCGGTGCAAATAGCCATGATCATGGTTTTAGAGCTGAAATTCAAACACTTGGAAACATAAGACACAGAAACATAGTGAGACTACTTGCATTCTGTTCAAACAAAGAAACAAATCTTCTTGTGTATGAATACATGAGAAATGGAAGCTTAGGTGAAGCATTGCATGGAAAAAAAGGCGCATTCTTGAGTTGGAACTTTCGGTACAAGATATCTATTGATTCTGCTAAAGGACTATGCTACCTTCACCATGATTGTTCTCCATTGATCCTACACAGAGATGTGAAATCTAACAACATTTTGTTGAGTTCCAATTTCGAAGCACATTTTGAATGA | 1371 | 0.3902 | MNNFTGEIPYKLGLNGNIQVLDLSSNKLTGVIPPHLCSSNQLKILILLNNFLFGPIPQGLGTCYSLTRVRLGENYLNGSIPDGFLYLPKLNLAELKNNYLSGTLLENGNASSSLCLQQLDLSNNALSGPLPHSLSNFTSLQILSLTGNQFSGPIPSSIGGLNQVLKLDLSRNLLSGEIPPQIGNCLHLTYLDMSQNNLSGSIPPLFSNIRILNYLNLSRNHLNQTIPKSIGTMKSLTVADFSFNEFSGINSTPGKKTNADFKLIFALGLLMCSLVFVITAIIKAKSFKKNGPGSWKMTAFKKLEFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGANSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLSWNFRYKISIDSAKGLCYLHHDCSPLILHRDVKSNNILLSSNFEAHFE | 456 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g02183 | 456 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 283 | 390 | - | - | |
Vifa1g02183 | 456 | ProSiteProfiles | Protein kinase domain profile. | 314 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g02183 | 456 | Pfam | Leucine Rich repeat | 185 | 200 | IPR001611 | GO:0005515 | |
Vifa1g02183 | 456 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 108 | 205 | - | - | |
Vifa1g02183 | 456 | Pfam | Protein kinase domain | 316 | 449 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g02183 | 456 | Pfam | Leucine Rich Repeat | 17 | 37 | IPR001611 | GO:0005515 | |
Vifa1g02183 | 456 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 435 | 447 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g02183 | 456 | SUPERFAMILY | Protein kinase-like (PK-like) | 305 | 453 | IPR011009 | - | |
Vifa1g02183 | 456 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 8 | 107 | - | - | |
Vifa1g02183 | 456 | Gene3D | Transferase(Phosphotransferase) domain 1 | 391 | 455 | - | - | |
Vifa1g02183 | 456 | Gene3D | Phosphorylase Kinase; domain 1 | 279 | 390 | - | - | |
Vifa1g02183 | 456 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 2 | 454 | - | - | |
Vifa1g02183 | 456 | Gene3D | Ribonuclease Inhibitor | 1 | 258 | IPR032675 | - | |
Vifa1g02183 | 456 | SMART | serkin_6 | 314 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g02183 | 456 | SUPERFAMILY | RNI-like | 2 | 247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g02183 | Vifa-Chr1 | 350277834 | 350279309 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g02183 | 2 | 454 | Receptor kinase-like Gene Family | AT5G65700 | 56.592 | 3.96e-180 | 528 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vifa1g02183 | Pkinase | 2.1e-23 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g02183 | - | - | hbr:110661583 | 732.635 |