Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02118 ATGTCACTGCCATCGATAACACCACCGCCACTCACCACTTCCTTCACGGCAAAGCCAACTCAACCACCGATCCGGCAGATTCCGGGAAGTCACGGATGGCCAATACTAGGTCCTTTGTCAGATAGGTTAGACTATTTCTGGTTCCAGAAGCCAGAAAGCTTCTTCAGAACACGAATGGAAAAGTACAAAAGCACCGTGTTCCGTACGAATGTTCCTCCAACTTTTCCGTTTTTCACCAGCGTTAATCCCAACGTTATTGCACTGCTTGATTGTAAGGCTTTCTCTCACCTCCTGGACATGGATTTGGTTGATAAGAAAGATGTTCTGGTTGGAGATTTTGTCCCTAGTGTTGAATTCACTGGGAATATTAGGGTTGGTGTTTATAGAGACGTTTCTGATCCTCAACATTCTAAGTCAAAGCAGTTCTCCATGCAAATATTGAAAGAAAGCTCAAGCATATGGGTACCCGAACTGGTTTCAAATCTAGACATATTTTTGGACCAAATTGAAGCAACATTGTCCACAACATCATCAGCAAGTTACATGTTCCCGCTACAACAATTCTTGTTCAAGTTCCTCTTCAAAGTCCTTGCTAAAGCCGACACTTCCCTCGACCCGAAAATTGCAGAATCAGGCTACTCCATGCTCAACAAATGGCTGGCGCTTCAGCTTCTACCTACTATCAGTATTGGCAAAGTTCAACCACTTGAAGAACTCTTTCTTCATTCCTTTTCTTATCCTTTCTCTCTTGTTAAAGGAGATTACAACAACCTCTATAACTTTATTCAACAACATGGTAAGGAAGTGGTAAAATGTGGAAAAGAATTTGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTCATTTTGGGTTTCAACTCATATGGTGGATTTTCAATTTTCCTTCCAAGATTAATAAACACCATAGCAAGTGACTCAACCGGTTTGCAAGAGAAGCTGAGAGAGGAAGCCAGAGAGAAAGCCGGTTCAACTCTCGGGTTCGACTCATTGAAAAATTTGGAGCTAATTAATTCAGTGGTTTACGAAACCCTTCGGATGAACCCGCCGGTTCCGCTTCAGTTTGGTCGAGCCAGAAAGGATTTTCAGCTCACTTCAAATGACTCATTATTCAATATAAAAAAAGGTGAGTTATTATGTGGATATCAGAAGCTTGTAATGAGGGATCCGGCCGTGTTCGACGAGCCGGAGAGTTTTAAACCGGATCGGTTTACTAAAGAGAAAGGCGCCGAGTTGTTGAACTATTTGTACTGGTCTAATGGACCGCAATCCGGTTCGCCAAGTGTGGCGAATAAACAGTGTGCAGGTAAGGACATTGTGACCTTCACTTCTGCCTTAATTGTGGCACACTTGCTTCGTAGGTATGATTCAATTAAAGGAGATGGTAGTTCCATAACTCTCTTAACAAAGGCCAAATGA 1440 0.425 MSLPSITPPPLTTSFTAKPTQPPIRQIPGSHGWPILGPLSDRLDYFWFQKPESFFRTRMEKYKSTVFRTNVPPTFPFFTSVNPNVIALLDCKAFSHLLDMDLVDKKDVLVGDFVPSVEFTGNIRVGVYRDVSDPQHSKSKQFSMQILKESSSIWVPELVSNLDIFLDQIEATLSTTSSASYMFPLQQFLFKFLFKVLAKADTSLDPKIAESGYSMLNKWLALQLLPTISIGKVQPLEELFLHSFSYPFSLVKGDYNNLYNFIQQHGKEVVKCGKEFGLSEDEAIHNLLFILGFNSYGGFSIFLPRLINTIASDSTGLQEKLREEAREKAGSTLGFDSLKNLELINSVVYETLRMNPPVPLQFGRARKDFQLTSNDSLFNIKKGELLCGYQKLVMRDPAVFDEPESFKPDRFTKEKGAELLNYLYWSNGPQSGSPSVANKQCAGKDIVTFTSALIVAHLLRRYDSIKGDGSSITLLTKAK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02118 479 PANTHER CYTOCHROME P450 26 23 462 - -
Vifa1g02118 479 Pfam Cytochrome P450 317 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 MobiDBLite consensus disorder prediction 1 23 - -
Vifa1g02118 479 PRINTS E-class P450 group IV signature 378 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 PRINTS E-class P450 group IV signature 441 459 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 CDD CYP74 56 479 - -
Vifa1g02118 479 SUPERFAMILY Cytochrome P450 22 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g02118 479 FunFam Allene oxide synthase, chloroplastic 22 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02118 Vifa-Chr1 337527284 337542716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02118 100 479 Cytochrome P450 AT4G15440 58.854 7.23e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02118 K10528 - gmx:100784395 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02118 1 337527284 337542716 Vifa1g02118 1 337527284 337542716 ECH