Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02115 ATGTCCGGTTGTCAACTTCCACCCTTTTCTACTCAAGTTGGTGCTGAAAAAGAAAAAAGGGTTGACGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAGGATATACTTCTTATCCAATCATGGCTCAGTGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAATACCATGGACAATCGCGGGAAAAGGATCAAGGTACAACATTCAATCTTGAGTACGCATGGCGACTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAGTTCTTCAAAAATAACAAAGACTTATGCTAGTGGGGCATCATCGGAGAACCCAGATACACATTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGACAAATAATATTCCAACTGCAACGGAAGATGCAAGGAATAAAAGAACAACGACAATGGAAAGACCAGCGCAATGTAAGAAGGACGAGATAGAAGTAAAGGTAATGCAAATTATGATGAAAGACACTTCTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAATATGGAATGTAGTTAG 660 0.3818 MSGCQLPPFSTQVGAEKEKRVDVKKKSREQFTRDEDILLIQSWLSVSKDPIVGVDQKAESFWVRVAANYNQYHGQSREKDQGTTFNLEYAWRLLKDEPKWMGESIGSSSKITKTYASGASSENPDTHSSYEFNSSSPMERPMGQKAAKRKGKTNNIPTATEDARNKRTTTMERPAQCKKDEIEVKVMQIMMKDTSTMSDSQRDIHEKYCNKMKKNMECS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02115 219 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g02115 219 MobiDBLite consensus disorder prediction 115 140 - -
Vifa1g02115 219 PANTHER - 21 214 - -
Vifa1g02115 219 MobiDBLite consensus disorder prediction 115 178 - -
Vifa1g02115 219 Pfam No apical meristem-associated C-terminal domain 84 203 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02115 Vifa-Chr1 337499455 337500262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02115 24 162 Glutathione S-transferase Gene Family AT5G41240 26.500 8.17e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02115 - - psat:127115199 337.806