Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02079 ATGTCTGACGCTTTGATCAATGGATTGGCTGGCGCTGGAGGAGGGATCATTGCGCAACTTATCACATACCCTCTTCAAACTGTTAACACTCGCCAACAAACCGATCGTGATCCGAAGAAGAATAACAAGAGTATTGGGACTTTCCAGCAAATGTGTCAGGTTGTGAAACATGAGGGGTGGGAGCGGTTGTATGGAGGTTTGACTCCATCGCTTGTGGGTACAGCTACATCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACCGAGCTGAAGCAGCTGCATTAGAGAAGAAAATGCTAGGCAATGGTGATGGTTCAGTTGGAATGTTCTCCTCACTTGTTGTTGCTGCTTTATCTGGTTGTGTTAACGTGCTGCTGACAAATCCGATATGGCTAGTTGTTACCCGCATGCAGACGCATAAAAAAGAGTCGAAGAGAACTATCCCGGATCCACGGTTGTCAGATGCCACCAAAGAAAAACTGCTTTCTACTGCAGAGCCTCTTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTACGATGAATCTGGAGTTTTGGGTTTCTGGAAGGGCGTATTACCAACATTGGTCATGGTTAGCAATCCTTCCATTCAGTTCATGTTGTATGAAACTTTGTTGGCAAAGTTGAAAAAAAGAAGCGCTAGCAATACTGTATCTGCTTTACAGATATTTCTTCTTGGAGCCATTGCTAAGCTCGGAGCTACCGTTGTAACCTATCCTCTTCTTGTTGTGAAGGCAAGGCTTCAAGCTAGACAGGTTAAAAATGGAGACAAGAGACACCATTACAAAGGTACAAGGGATGCTATATTTAAGATGATCCGCTACGAAGGGTTCAATGGATTTTACAAAGGAATGAGAACCAAAATTGTACAAAGTGTTCTAGCTGCAGCTGTTTTGTTTATGGTGAAGGAAGAACTAGTAAAACAGACTCGATTTTTGCTCGGAAAGAATGTTCCCAACACTTTAAAGCCATAG 1002 0.4261 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKNNKSIGTFQQMCQVVKHEGWERLYGGLTPSLVGTATSQGVYYYFYQIFRNRAEAAALEKKMLGNGDGSVGMFSSLVVAALSGCVNVLLTNPIWLVVTRMQTHKKESKRTIPDPRLSDATKEKLLSTAEPLAYGTSHVIQEVYDESGVLGFWKGVLPTLVMVSNPSIQFMLYETLLAKLKKRSASNTVSALQIFLLGAIAKLGATVVTYPLLVVKARLQARQVKNGDKRHHYKGTRDAIFKMIRYEGFNGFYKGMRTKIVQSVLAAAVLFMVKEELVKQTRFLLGKNVPNTLKP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02079 333 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 320 IPR044712 GO:0006862|GO:0055085
Vifa1g02079 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Vifa1g02079 333 SUPERFAMILY Mitochondrial carrier 3 314 IPR023395 -
Vifa1g02079 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Vifa1g02079 333 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Vifa1g02079 333 Pfam Mitochondrial carrier protein 109 221 IPR018108 -
Vifa1g02079 333 Pfam Mitochondrial carrier protein 227 316 IPR018108 -
Vifa1g02079 333 Gene3D Mitochondrial carrier domain 9 321 IPR023395 -
Vifa1g02079 333 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 318 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02079 Vifa-Chr1 330559854 330563294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02079 24 323 Chloroplast and Mitochondria Gene Families AT2G47490 29.773 1.04e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02079 K13354 - gmx:100775784 501.901