Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02016 ATGGAAAATCTGAGTAGGTACTTCAAGGTTTTGATTATCTGTCTTTTGGCCTCATCGACTCATGCTCAGCTGGAGCTAGGATTTTATTCTAAGAGCTGTCCAAAAGCCGAACAAATCATTCAAAAATTTGTTCATGAACATATCCGCAATGCGCCATCGCTTGCGGCTGCTTTAATAAGAATGCATTTTCATGATTGTTTTGTCAGGGGATGTGATGGATCAGTTCTTCTGAACTCAACAACCAACCAAGCTGAAAAAAATGCTCCTCCAAATCTTACAGTTAGAGGATTTGATTTTATTGACAGAATCAAGAGCCTTGTTGAAGCCGAATGTCCTGGTGTTGTTTCTTGTGCTGATATCATAGCCTTATCTGCTAGAGACTCTATTGTAGTCACGGGTGGTCCCTATTGGAAAGTTCCAACCGGTAGAAGAGATGGAGTAATATCAAACTTGTTGGAATCCAATCAAAACATTCCTGCTCCATTTAACAACTTCACCACCCTCCAAACTCTCTTTGCCAATCAAGGACTTGATATAAAAGACTTAGTCCTCCTCTCAGGTGCTCACACAATTGGTATCTCTCTTTGCACTTCATTTTCGAACCGTTTGTACAATTTTACTGGAAAGGGTGATGAAGATCCATCACTTGACAGTGAATATGCAACAAATCTTAAGACATTCAAATGCAAGAACATCAATGACAATACTACAATAGTCGAAATGGACCCCGGAAGTCGAAACACTTTTGATCTTAGTTATTATAGTCAAGTTGTCAAAAGGAGAGGTTTGTTTGAATCTGATTCTGCTTTGTTGACAAATTCAGTTACAAAGTCTTTGGTGACTCAATTTCTTCAAGGGTCACTTGAAAATTTCTATGCTGAATTTGCTAAATCAATTGAGAAAATGGGTCAAATTAAAGTTAAGACAGGGTCACAGGGTGAGATCAGGAAACATTGTGCACTTGTAAATAGCTAG 975 0.3856 MENLSRYFKVLIICLLASSTHAQLELGFYSKSCPKAEQIIQKFVHEHIRNAPSLAAALIRMHFHDCFVRGCDGSVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALSARDSIVVTGGPYWKVPTGRRDGVISNLLESNQNIPAPFNNFTTLQTLFANQGLDIKDLVLLSGAHTIGISLCTSFSNRLYNFTGKGDEDPSLDSEYATNLKTFKCKNINDNTTIVEMDPGSRNTFDLSYYSQVVKRRGLFESDSALLTNSVTKSLVTQFLQGSLENFYAEFAKSIEKMGQIKVKTGSQGEIRKHCALVNS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02016 324 FunFam Peroxidase 159 302 - -
Vifa1g02016 324 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 Gene3D - 27 323 - -
Vifa1g02016 324 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vifa1g02016 324 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601|GO:0042744
Vifa1g02016 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Vifa1g02016 324 PANTHER PEROXIDASE 25-RELATED 13 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g02016 324 Gene3D Peroxidase, domain 2 159 302 - -
Vifa1g02016 324 FunFam Peroxidase 27 167 - -
Vifa1g02016 324 SUPERFAMILY Heme-dependent peroxidases 23 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02016 Vifa-Chr1 321235940 321237325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02016 21 324 Peroxidase AT1G05260 69.737 6.62e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02016 K00430 - gmx:100803114 541.191