Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02011 ATGGATCCCAATCAACATAACTCTTGGTCTAATTTTATGCAAAATGGTGGTATTCTTCCTTCAATTCCAAATCAACAAAGCAACTCATACATCGGAAATGTACCTCTTATCTCAAATTCACACCATAACCCAAATTTTCAAAACTCTCATTTTATCCCAAATTCACAAAATAATCCACACTTTGGAAATTACTCATATCATACTCCACCTTATCCATATCAATATCAACAACTTACATCTCAACCAACTAACCCCACTATTCCTCATGTGGCTCAAATAGGCAGTAGTGAAGTTGCATCTGCACTGGTTGCGAAAACGCCTAAACAAAGGTTCCAACAAAAAGAGGATGAAGTTATCATTCAATCATGGCTCAACTTTTCAAAGGATTCAATTGTTGGGGTTGATAAAAAAGGAGATAGTTTTTGGAACAGGATTGGCGAAGCTTACAACAAGCATCGTGACACCAATTACAAAGAGAGGAAACCGATGGCACTTAAAGGTCGATGGCACAAAATTAATCCATTTGTTCAAAAGTTTGTTGGATGCTACAAACAAGCTGTGTCTACACAACAAAGTGGGAGCTCCGAGAGCAATATCATGCAAGCTGCATATAAAATTTATTTTCAAGATGAAGGTGAAAAGTTTATATTTGAGGCTGCACGGAGATTATTGAAAGATGAACCTAAATGGCTCGCGGGTTCATCAGAAGCTTCTACAAAAAGAACAAAGAATTCAGCTTCAGGAGCATATTCTTCATCTTCTAATCCACCGACACCAACGAGTAGCGGATACAGTCCATCATCGCCTACTTTGTCACGTCGTCCAATCGGTCAAAAGGAAGCCAAAAGGAAAGAGAAGGAAAAAAAAAAGGTTGATGCAAAGATTAAGAAGGCTGAGAGTGCGGAGGAAAGATTGAATATGAATGATCTGCAAATACTCTCCAAAGATACATCAAATATGGATACACGACAACTACAAGCTCATGAAATATTGTGCGACATGATTAGAGAAAAATATGGAATTAATTAG 1029 0.3761 MDPNQHNSWSNFMQNGGILPSIPNQQSNSYIGNVPLISNSHHNPNFQNSHFIPNSQNNPHFGNYSYHTPPYPYQYQQLTSQPTNPTIPHVAQIGSSEVASALVAKTPKQRFQQKEDEVIIQSWLNFSKDSIVGVDKKGDSFWNRIGEAYNKHRDTNYKERKPMALKGRWHKINPFVQKFVGCYKQAVSTQQSGSSESNIMQAAYKIYFQDEGEKFIFEAARRLLKDEPKWLAGSSEASTKRTKNSASGAYSSSSNPPTPTSSGYSPSSPTLSRRPIGQKEAKRKEKEKKKVDAKIKKAESAEERLNMNDLQILSKDTSNMDTRQLQAHEILCDMIREKYGIN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02011 342 PANTHER - 96 338 - -
Vifa1g02011 342 MobiDBLite consensus disorder prediction 235 274 - -
Vifa1g02011 342 MobiDBLite consensus disorder prediction 231 302 - -
Vifa1g02011 342 MobiDBLite consensus disorder prediction 276 302 - -
Vifa1g02011 342 Coils Coil 281 308 - -
Vifa1g02011 342 Pfam No apical meristem-associated C-terminal domain 215 309 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02011 Vifa-Chr1 321046595 321047837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02011 73 321 Glutathione S-transferase Gene Family AT5G41240 33.086 1.35e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02011 - - mtr:11446189 228.794