Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01983 ATGAGTCCTGAAAATAATAGAGACGCGGAATTTGGTTATGGAGCCGGGGAAGTTGATCCAGATAAAGCTTTGCATCCTGGTTTAGTATATGATGCTGATGGGTTCCTTACAACCGCTGCTCTACAATTAATCACGAGAAATAATAGCAGTTGCTCGGAAATAACACCTGCATTAGCAAGAGATTTGAACTATCCATCCTTTGCTTTAAAAGCCTCACATTCTAAACAACATGTCAGTGGAAGATTTCATAGAACTGTCACCAATGTTGGAACACCATTCTCTACGTATAGAGCAATTGTGACACCTCCAAAAGGATTACATATTTATGTGATACCTATTGTTTTGTCATTCACTTCACTAGGAGAAAACCATACATATGTTGTCATTGTTGATGGAGTTTTGAACAAATCAATGGAATCAGCTTCTCTGACTTGGGATGATGGATATTTCAAAGTTAGAAGTCCGATTGTTGTTTTCCACGAACGAGCTGAGAGGGTTGCAACATCTTCAACTTGA 516 0.3876 MSPENNRDAEFGYGAGEVDPDKALHPGLVYDADGFLTTAALQLITRNNSSCSEITPALARDLNYPSFALKASHSKQHVSGRFHRTVTNVGTPFSTYRAIVTPPKGLHIYVIPIVLSFTSLGENHTYVVIVDGVLNKSMESASLTWDDGYFKVRSPIVVFHERAERVATSST 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01983 171 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 158 IPR045051 -
Vifa1g01983 171 Gene3D - 35 160 - -
Vifa1g01983 171 Pfam Fibronectin type-III domain 61 158 IPR041469 -
Vifa1g01983 171 Gene3D Peptidase S8/S53 domain 5 33 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01983 Vifa-Chr1 318370170 318370685 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01983 5 159 Subtilisin-like Serine Gene Family AT3G46850 47.024 2.11e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01983 - - cam:101506276 206.838