Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g01866 | ATGAAAAAGAACTGCGAACTCTGCAAAGCTCCGGCTACAACTTTCTGTGAGTCCGACCAGGCTAGCTTATGCTGGGACTGCGATTCCAAGATCCACAGTGCAAATTTCCTTGTTGCCAGACACGTCAGGACTCTCCTCTGTCACCGGTGCCAGTCTCCGACGCCGTGGAAAGCCTCCGGTGCTACGCTTAGTAACGCGCTTTCTTTGTGTGAAACATGCGGTTGCGGTGGTGGTGGTGGAAGAAAATTTGAAGATGAACAGGAAGAAGAAAGTGAAGGTGACAATGAGAATGAGGATGACGATGAAGTAGATACTGATTTTGATGAGGAGGATGAAGAGGAAGAGGAGCTTGATGGTGATGAGGATGGTGATAATCAGGTTGTTCCTTGGTCGTCTACGGCGGCGGCGCCGCCGCCTTCCAGTTCTTCCGGTAGCGAAGAGTCGGTTAGTAAGTCTAACGATAACGATGAGGAGGTTGTTTCGAAGTTAGTTACAATAAACTCAATTTCTTTGAAACGACGTCGTGAAGAGGATCGTGATTTTCAGGCTTCAGATTCGAAAATTTGCGTAGATCAGCGTATGTACGGTGGTGAGAGGAGGAGAGACGACGGAGAACCGTCGTCGAAGGCGTTGATCCGGCAAGTTAACGACGGAAAGGTCACGAGCAATCTCAGCCGCACGATTGAGTTGGCCGTACAATAA | 702 | 0.4929 | MKKNCELCKAPATTFCESDQASLCWDCDSKIHSANFLVARHVRTLLCHRCQSPTPWKASGATLSNALSLCETCGCGGGGGRKFEDEQEEESEGDNENEDDDEVDTDFDEEDEEEEELDGDEDGDNQVVPWSSTAAAPPPSSSSGSEESVSKSNDNDEEVVSKLVTINSISLKRRREEDRDFQASDSKICVDQRMYGGERRRDDGEPSSKALIRQVNDGKVTSNLSRTIELAVQ | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g01866 | 233 | MobiDBLite | consensus disorder prediction | 81 | 160 | - | - | |
Vifa1g01866 | 233 | SMART | bboxneu5 | 1 | 46 | IPR000315 | GO:0008270 | |
Vifa1g01866 | 233 | MobiDBLite | consensus disorder prediction | 192 | 208 | - | - | |
Vifa1g01866 | 233 | Pfam | B-box zinc finger | 3 | 42 | IPR000315 | GO:0008270 | |
Vifa1g01866 | 233 | MobiDBLite | consensus disorder prediction | 87 | 123 | - | - | |
Vifa1g01866 | 233 | MobiDBLite | consensus disorder prediction | 192 | 214 | - | - | |
Vifa1g01866 | 233 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - | |
Vifa1g01866 | 233 | CDD | Bbox1_BBX-like | 5 | 46 | - | - | |
Vifa1g01866 | 233 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 4 | 202 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g01866 | Vifa-Chr1 | 303011249 | 303012031 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g01866 | 1 | 138 | C2C2-CO-like Transcription Factor Family | AT4G27310 | 42.683 | 4.10e-34 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Vifa1g01866 | zf-B_box | 2.2e-07 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g01866 | - | - | mtr:11417549 | 209.534 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g01866 | 1 | 303011249 | 303012031 | Vifa1g01866 | 1 | 303011249 | 303012031 | ECH |