Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01793 ATGGATCCTAATCAATTTCATTATCAACAAGCTATGTTCAATTTCATGCAAAATTATCAAAATCATAATCCTCAAAATTCTCAAATTCCATCGATGCCAACAAACCCCGCCATATTTTTTCCATCACCAAACAATCCAAATATGTATCATATACCTCAAATGAATTCTAATAGTATGGAATTTTCTACCAAAGTTCCACCATTTTCTACTCAAGTTGGTACTCAAGTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAGGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGGGAGTTTTTGGTTAAGAATAGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGGGGGCAATTAAAATGCCGTTGGCATAGAATAAATGGTTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCAGATAACGATATCATGGCCTCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTACGCATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAGTAACAAAGACTTCTGCTAGTGGGGCATCATCGGCTAACTCAGATACACCTTCAAGTTACGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAACACAAGATGCAAGGAATAAAAGAGCAGCAACAATGGAAAGACTAGCTCAAAGTAAGGAGGACGAGCTAGAATTAAAGGCAATGCAAATCATCATGAAAGACACTTCTACTATGAGTGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAATTTGGATTGTAGTTAG 969 0.3674 MDPNQFHYQQAMFNFMQNYQNHNPQNSQIPSMPTNPAIFFPSPNNPNMYHIPQMNSNSMEFSTKVPPFSTQVGTQVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAGSFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSDNDIMASAHAFFAQDEGTTFNLEYAWRLLKDEPKWMGESIGNSSKVTKTSASGASSANSDTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNATQDARNKRAATMERLAQSKEDELELKAMQIIMKDTSTMSDSQRDIHEKYCNKMKKNLDCS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01793 322 MobiDBLite consensus disorder prediction 246 270 - -
Vifa1g01793 322 MobiDBLite consensus disorder prediction 206 270 - -
Vifa1g01793 322 MobiDBLite consensus disorder prediction 208 243 - -
Vifa1g01793 322 Pfam No apical meristem-associated C-terminal domain 187 306 IPR029466 -
Vifa1g01793 322 PANTHER - 59 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01793 Vifa-Chr1 292018419 292019387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01793 78 284 Glutathione S-transferase Gene Family AT5G41240 31.963 3.23e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01793 - - psat:127115199 500.745