Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01785 ATGGCAGCCCAATTCGCCGCCGCTGCAGCAACAACAACATCCAACGTTTCTCTTCTCCGCCTTCCCTCTCTCTCGAGTAAAGATTTGATTCCGGAAAGACGAGTTACATTCTACAGGAAAAGGAGTTTTGCCATCAAAGCTCTTGCAGGCAGTTCTCTGGGAAAATCAGCTACACGACTCACGGCTGTTTCATCTCCACTATCTACTGATAAACTAGGTCATCTCTCACTCAGTGTTCCTATATCTCGAAGAGGCAGTTGTACCACCCGTCCACAAGCATATATATACCATTGGTCTGGCTTTCGAATCCCTGCAAATGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCCTGTATACCCTATCTGATAGCATTGCAGATGTCTGCAACTGGATTCCATGTAATGGCGGGAATGCTACTGGAAATTGCTCTTCAGATAATATGGGTTGCAAGCAATTTCTTGCCGCTCATACACTTCAAGGGAACACTTGGGATGTATTACTGGGCTGGTGTGGCGTTGGCATATATTCTCATAAGCATGCATTCCATCAGGTGTGCTCTTCTTGGTACATTTTCGAATATCCCTGTTATTAGTGAATCAGCTTTCCTTCATTCTCTATTTAGTTTAGGAGGGTTCCAGCGGCCCTTTTAG 654 0.4541 MAAQFAAAAATTTSNVSLLRLPSLSSKDLIPERRVTFYRKRSFAIKALAGSSLGKSATRLTAVSSPLSTDKLGHLSLSVPISRRGSCTTRPQAYIYHWSGFRIPANAEKPEWWWRTLSCIPYLIALQMSATGFHVMAGMLLEIALQIIWVASNFLPLIHFKGTLGMYYWAGVALAYILISMHSIRCALLGTFSNIPVISESAFLHSLFSLGGFQRPF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01785 217 Pfam Chloroplast import apparatus Tic20-like 86 135 IPR005691 -
Vifa1g01785 217 Pfam Chloroplast import apparatus Tic20-like 133 202 IPR005691 -
Vifa1g01785 217 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 133 206 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01785 Vifa-Chr1 290202035 290203911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01785 102 216 Chloroplast and Mitochondria Gene Families AT4G03320 37.278 1.03e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01785 - - tpra:123896555 239.965