Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01780 ATGGCGAACGTGTTAGAGAAAGAAACTGGGTTCACCATGTTCAGTGATGATGAGCTAAAGGATGTTAACGAGGTGAAGAGAGTTGGAGAATATGTTGAAGTCATGTGCGGTTGTACTAGCCATAGATATGGTGATGCTGTTGGATGGCTTAGGGTTTTCGTTAATGGTTACCTTGAAATAACCTGTGAATGTACCCCTGGTTGTAAAGAAGACAAGTTGACTCCTGCTGCATTCGAGAAACATTCTGGAAGAGAAACAGCTAGGAAATGGAAGAACAATGTGTGGGTAATAATTAATGGTGAGAAAGTTCCTTTGTATAAAACAGTTCTTCTCAAATACTACAATGAAGCATTAAGAACAGCCAATGGATCACACAAATCGCAAAATGGACGAGGCCATCGAGATGAGTTTATCCGTTGTACTAGATGTAACAAAGAGCGTAGGTTCCGTCTGAGAACAAAAGAGGATTGCCGCATTCATCATGATGCTTTGGCTGATCCAAATTGGAACTGTTCTAATCTTCCGTATGACAAAATTACATGTGATAATGAAGAAGAAAGAGGAAGTCGAAGGGTTTACAGAGGATGCACTCGTTCTGCAGCATGTAAAGGTTGCACTTCTTGTGTATGCTTTGGGTGTGGGATATGCCGTTTTTCAGATTGCAATTGCCAAACTTGTACTGACTTTACCAGGAATGCCAATGTCAAAGCTTGA 714 0.409 MANVLEKETGFTMFSDDELKDVNEVKRVGEYVEVMCGCTSHRYGDAVGWLRVFVNGYLEITCECTPGCKEDKLTPAAFEKHSGRETARKWKNNVWVIINGEKVPLYKTVLLKYYNEALRTANGSHKSQNGRGHRDEFIRCTRCNKERRFRLRTKEDCRIHHDALADPNWNCSNLPYDKITCDNEEERGSRRVYRGCTRSAACKGCTSCVCFGCGICRFSDCNCQTCTDFTRNANVKA 237
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01780 237 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Vifa1g01780 237 PANTHER PROTEIN ULTRAPETALA 1 10 234 IPR020533 -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Vifa1g01780 SAND 9.7e-05 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01780 - - gmx:100796203 429.483