LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g01755	ATGAAAATTATTATTCCTCATCCATCCAAAAATTCTATTAATCCATCTTATTTTAAAGATTATTATATTGTTGTTCTTTATTTGTGGTATAGGATTCTGGAAGAAATTGAAGGAATAGGAGTATTAAAATCTCATTTGAATCTGACTTCGAAAAGTTCTACTGCAAATTCTGTCTCTGAGGACGTGGAGAATAAGGATTTGTCTGATAAAAGTGTGAGTAACGAAATTGAAGAGGATTTAGGAGATAAATTATCTGGAGTTGATTTCAATGTTGATTTTGCTGTTAATGGCGTAGAGGACATTTGGAAAATCAATTTAAAAAATATGAACATTAAAGATGTGATGAAATATCATTTTCCAAATGTGGAGGTGGCATTTATGTTTTATAATAGGTTTGCTGGTTTACATGGTTTTGCAGCAAGAAAAAGCAAGATATTGAGGAATAAAAATGGTGAAGCAACACAACAAACATTTTTGTGTTATAGACAAGGCTATAGAGAAGAAAAAGTTGGATTCTGCCAATGTGACATGTACAATGAAGTCGCTAAAGATAAGAGAAGTGACTTGTCAGATGCAGAAGTTGCACTTGAGTTTATTGCAACCATGTCTTGTAGTGATGAAATGTTGTTTTTGAGACCTAGTATTGACGAGAATGGAAGATTGCAACATCTATTTTGGTGTGATGGTGTGTATCGTAAGGACTGA	705	0.3262	MKIIIPHPSKNSINPSYFKDYYIVVLYLWYRILEEIEGIGVLKSHLNLTSKSSTANSVSEDVENKDLSDKSVSNEIEEDLGDKLSGVDFNVDFAVNGVEDIWKINLKNMNIKDVMKYHFPNVEVAFMFYNRFAGLHGFAARKSKILRNKNGEATQQTFLCYRQGYREEKVGFCQCDMYNEVAKDKRSDLSDAEVALEFIATMSCSDEMLFLRPSIDENGRLQHLFWCDGVYRKD	234

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g01755	234	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	60	169	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g01755	Vifa-Chr1	285977668	285978712	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vifa1g01755		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g01755	-		K17604	mtr:112417123	112.849