Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01686 ATGACACCCTTGCTCATCCAAATTCCGCGGTGGATGATGCATACAAAGACTCAAGAAGTCTTCGGTTCAAAGCTCATTCAGCATTTCTATGATATTGTCTTCTCGGAATCAACCTCTATAGTACCATATGATATCTATTTCACTAAGGTTTGTCATGGAGCAACAATAGAACTGTTGAATTTTGCTGATTTGTTTGCGAATAGAATCACCTCAGCGTGGCGTATTTTTAACAAGCAGCTAAAGAAGCAAATAATAGTTTATGTGGAAAACATGTTGTTGCCGGCTTATGAAAACTTCATTACAGAATTTGAGAATGTTGTTGGTAAAAATGCCGACGATTATATCATGTATGGAGTGTCCGACATTCAAGATGAGCTCAATAATTTGTTTCTGTTGCAGGATGTTGAGTCTGTCAGAGGAGCGGTTAGTAATCAGTTAGTTAGTTAG 447 0.3781 MTPLLIQIPRWMMHTKTQEVFGSKLIQHFYDIVFSESTSIVPYDIYFTKVCHGATIELLNFADLFANRITSAWRIFNKQLKKQIIVYVENMLLPAYENFITEFENVVGKNADDYIMYGVSDIQDELNNLFLLQDVESVRGAVSNQLVS 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01686 148 Pfam Exo70 exocyst complex subunit 67 127 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vifa1g01686 148 SUPERFAMILY Cullin repeat-like 68 130 IPR016159 -
Vifa1g01686 148 Gene3D Exocyst complex component Exo70 58 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01686 Vifa-Chr1 275977142 275977759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01686 68 130 EXO70 exocyst subunit family AT5G58430 44.615 1.75e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01686 - K07195 psat:127118474 93.5893