Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01677 ATGACGGAGCCTCTACTCAGAGGCGAAAGCAGTGGACTGAGAAACCGTTCGCGAGGGATAGTCCGCCGCACCGATGCTATCACCTACGGTTCCAATTACGAGAAAGCGGCCGCGCTTATCGATCTGGCTGAAGATGGTGTTGGTATACCCGAGCAACTTCTGGATTCATCAAACTTTCAAAGTTATTCAAGATTTTATTTTATATTCACTAAATTTGATCTCATCTGGTCTCTTAGTTATTTTGCTCTGATAGTCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAAGAATACCATGCATTCTTGCAATGATAGAGAGTATTTCTTTTTGGGACAGTTGCCATATCTAACTGCCGCACAATGTATTATTTATGAGAATGTTGGATATCTCAACAAAGATCAAATCATTAGGCTCTTTGAGGAGGTGAACAATTATAGGACTTTGCCAAAAATCTCCAAGGAAGAATTTGAGCTGATATTTGAGGAGCTGGATGACACCCATGATGTAAAGATTAACAAGGATGAATTTGCTGATATTTGCAATGCGATTGCTTTAAAATTCCAGAAGGAAGATGTGCTTTCTTACTTCGACTATTTAGTATTCTACCATTCACCAACGTCAAAGAGATTGAAAGCTTTCGTAAGGAGCACCATTTTTGGATACATAGTGACGTTTGTACTCATAGTGAATCTGTTTGCCGTAATTATTGAGACAACGGTATGA 726 0.3953 MTEPLLRGESSGLRNRSRGIVRRTDAITYGSNYEKAAALIDLAEDGVGIPEQLLDSSNFQSYSRFYFIFTKFDLIWSLSYFALIVLNFLEKPLWCEKNTMHSCNDREYFFLGQLPYLTAAQCIIYENVGYLNKDQIIRLFEEVNNYRTLPKISKEEFELIFEELDDTHDVKINKDEFADICNAIALKFQKEDVLSYFDYLVFYHSPTSKRLKAFVRSTIFGYIVTFVLIVNLFAVIIETTV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01677 241 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 128 IPR044581 GO:0005245
Vifa1g01677 241 Gene3D - 125 184 - -
Vifa1g01677 241 ProSiteProfiles EF-hand calcium-binding domain profile. 152 187 IPR002048 GO:0005509
Vifa1g01677 241 SUPERFAMILY EF-hand 129 197 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01677 129 241 Ion Channels AT4G03560 63.158 3.18e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01677 K16900 - vum:124836709 217.238