Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01673 ATGGCTTCTGGACCATTCATTCTTGGTAACAGCGATTCCGAGAGACATAATTTCTGTTCCGATGATGTCTTTTGTCCATACGATGACTTTACAAACGAGGATTCTTCGAGCGTCACTCACGTCGATTCCAGTAAGGATTTTCATGTTTCAAGGATGATGAAAACACCAACATTTCCTGCCACAGTTATTAACACACCTGAAGGTTTTTTTAGCCAAGATGTTATTGCGAAAACCGTTGAGAAGAGTATGAAAACATGTACTGATAACCTTATGAGGTTTCTTGAGGGAATTAGTTCGAGGCTATCGCAATTGGAATTATATTGTTACAATCTAGACAAATCAATTGGAGAAATGAGATCTGAGTTAACTAGTGATCATGAGGAGGTGGATTCGAAACTCAAATCTCTTGACAAACACCTTCAGGAAGTACACAGGTCTGTACAAATTTTAAGAGACAAACAAGAGATAGTCGAGACACAGAAAGATTTAGCCAAGCTTCAACTTGCTCGGAAAGGATCACCTTCCTCAAATCATTTGCAGTCCAACGAGGAGAAGCTTTCCTCTTCTGACGTTGATCCAAAAAGAACTGATAATGCACATGTTACATCATCTGAGCCACAAAACCTGCAGCTAGCTCTTGCCCTTTCTCATCAACAGCCTATGGCCTTCTCATCTAAGGCTCCATCCTCAAATGTGACTCAAACCACGCAACAACCTCATTATTACATGTTGCCTCCTCCTTCTCCCAATCTGTCGGCTGCAGCTCAACTTCCTCAGAATCAGTATTCTCCTTCTGATTCACAGTATCGATATCACCCATCAACATCATCTCAAGTAACACAGAACCCGACTGCGCAACAATTTTCTCAGTTTCAGCAACAGCAACCACAGCAGCAGCAACAGCAATGGCCTCAACAGTTACCTCAGCAGGTGCAGCCTCAGCAACCACCCTCAACACACTCTCACACGAGACCTCCATCAGTAAATGCTTACACTCCGTACCATACAAGCCAAGCTACAAGTCCATCTCCCACGGCCACTGACAACACATTTCCGAACAGCATGCCAATGCAAAATCCATATCCAGGGATTCCGCCGCAAATCAAGGGCCATTCTGCAGCCCAACCAGGTAATCCCTATGGAAGTAGTGAGGTCCATACTGCACCTCCTCCTGCTAGCGCGTACGCGATGAACAGAAGTGAGGGCGGACAAGCAAGTTACCCTACCCAACCTTCTCAATTTGCTCAAAGTGTATATCCTCCTCAAAGTGCTCCCCTTCAAAACCCTGCGCCACATAATCCAACAATCAGAAATCCTAGCCAGCGGCAACTCATCCGCAACCATCCTTACAATGAGTTGATTGACAATTTGGTGAATATGGGAGTCAGAGGTGATCTTGTTGTAAGCATTATTCAGAGGATGGAGGAAACCGGGCAGCCTGTGAATTTTAACTCTGTACTAGACAGGTTGAATGCGCATAGTTCACTGGGTCCCCAGAGGGGATGGTAA 1509 0.4486 MASGPFILGNSDSERHNFCSDDVFCPYDDFTNEDSSSVTHVDSSKDFHVSRMMKTPTFPATVINTPEGFFSQDVIAKTVEKSMKTCTDNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSELTSDHEEVDSKLKSLDKHLQEVHRSVQILRDKQEIVETQKDLAKLQLARKGSPSSNHLQSNEEKLSSSDVDPKRTDNAHVTSSEPQNLQLALALSHQQPMAFSSKAPSSNVTQTTQQPHYYMLPPPSPNLSAAAQLPQNQYSPSDSQYRYHPSTSSQVTQNPTAQQFSQFQQQQPQQQQQQWPQQLPQQVQPQQPPSTHSHTRPPSVNAYTPYHTSQATSPSPTATDNTFPNSMPMQNPYPGIPPQIKGHSAAQPGNPYGSSEVHTAPPPASAYAMNRSEGGQASYPTQPSQFAQSVYPPQSAPLQNPAPHNPTIRNPSQRQLIRNHPYNELIDNLVNMGVRGDLVVSIIQRMEETGQPVNFNSVLDRLNAHSSLGPQRGW 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01673 502 MobiDBLite consensus disorder prediction 253 357 - -
Vifa1g01673 502 MobiDBLite consensus disorder prediction 220 241 - -
Vifa1g01673 502 MobiDBLite consensus disorder prediction 170 184 - -
Vifa1g01673 502 MobiDBLite consensus disorder prediction 399 418 - -
Vifa1g01673 502 MobiDBLite consensus disorder prediction 185 199 - -
Vifa1g01673 502 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 12 502 - -
Vifa1g01673 502 MobiDBLite consensus disorder prediction 168 206 - -
Vifa1g01673 502 MobiDBLite consensus disorder prediction 220 418 - -
Vifa1g01673 502 Pfam UBA-like domain (DUF1421) 450 494 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01673 Vifa-Chr1 274718071 274720050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01673 64 170 Trihelix Transcription Factor Family AT5G14540 37.383 1.14e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01673 - - aip:107610486 505.753