Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01662 ATGGATGCGCAAGCCAAGAAAAAAGCATTTTTCCGTGCCAAATTGAATGCCCAGAAAAAGGACAAACGCATAGAATCTCCCCTTGTTAGGTATAATGAATCTGATCAGCCTGTTTGTCGGGTTTGTGACGTTGTTCTGAAGTCTGAGTCCCTATGGGATGCACATCAAGTTTCTCGAAAACATCGTGAGGCAATAAGCAATCTTAAAGCTAATGCGGCTGGGTTAACCAAGCAGAACAATGCTGAGCCGGATATTCCCACTAAACGGCCTAAACCTGAGCAGCCTTCAGACTCACAGTTCAAAATTCCTCAAAGTCCACAAGTGCCTAAACCTCAGTCATCATCCGTTCTTCCACCAGATTTTTTTGACAACAATGACGCAAAGAAGATGAGATCGGAAAAGGACCCTGTCCATTCAGTGGACTCAGGTTTCGGTAGAAACACAGGGGCTTCTGCTCAAAGTCTGGTGTCAAACTCGGCCAAAGATCACTTTGATGGAAATGATACTACGCAGTCAAAGACTAATCAAGCAACAATGGAGAATAGGAAAACATCAGTCAAGATTAAGGATGCAGAGAACAAGCAGGAAAAAGGGGCTCTCCCTGAAGGGTTTTTTGATAATAAAGAGGCCGACTTGCGGGCACGTGGCATTAAGCTTGTAAAACCAGATGTCAAAGACGAGTACAAGGAGTTTGAGAAGTTGATTCAAGAGGATTTGCGGGAGGTGGATGACCGGTTAGAAGAAGAAGAGATTGATGCTGCAGAAACGATAGAAGAAGCCGAATCTGCTGAGCAAAGAAAGTTAAAGGAGAAAGTGGAAATGTTGAAGACGAAGAGATTGGAGTTAAAGGCTGCTAAATCTGCAAAGCGTCGTAAATCTTCTGAGGTTGTGACTAAGAAGTCTATACATGAAGAGTCATCCAGTGATGATGATGAGAGTGGTGAAAACTTTGCTGTTGACTGGAGAGCACAACACTTGTGA 981 0.4363 MDAQAKKKAFFRAKLNAQKKDKRIESPLVRYNESDQPVCRVCDVVLKSESLWDAHQVSRKHREAISNLKANAAGLTKQNNAEPDIPTKRPKPEQPSDSQFKIPQSPQVPKPQSSSVLPPDFFDNNDAKKMRSEKDPVHSVDSGFGRNTGASAQSLVSNSAKDHFDGNDTTQSKTNQATMENRKTSVKIKDAENKQEKGALPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLREVDDRLEEEEIDAAETIEEAESAEQRKLKEKVEMLKTKRLELKAAKSAKRRKSSEVVTKKSIHEESSSDDDESGENFAVDWRAQHL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01662 326 MobiDBLite consensus disorder prediction 284 326 - -
Vifa1g01662 326 Coils Coil 232 285 - -
Vifa1g01662 326 MobiDBLite consensus disorder prediction 97 111 - -
Vifa1g01662 326 MobiDBLite consensus disorder prediction 68 202 - -
Vifa1g01662 326 MobiDBLite consensus disorder prediction 144 182 - -
Vifa1g01662 326 MobiDBLite consensus disorder prediction 284 307 - -
Vifa1g01662 326 Pfam Zinc-finger of C2H2 type 39 61 - -
Vifa1g01662 326 Gene3D Classic Zinc Finger 34 70 - -
Vifa1g01662 326 MobiDBLite consensus disorder prediction 124 140 - -
Vifa1g01662 326 MobiDBLite consensus disorder prediction 183 202 - -
Vifa1g01662 326 SUPERFAMILY beta-beta-alpha zinc fingers 31 72 IPR036236 -
Vifa1g01662 326 PANTHER UNCHARACTERIZED 1 326 IPR040050 GO:0003676|GO:0005681|GO:0008270
Vifa1g01662 326 Coils Coil 58 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g01662 1 326 C2H2 Transcription Factor Family AT3G02860 55.183 1.86e-97 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01662 K13104 - gmx:100808515 402.519